Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P11
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   3.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 351 CCPENEVKEGIEALAGDLPATAP 419
           C P++ V  G   L G  PA++P
Sbjct: 144 CTPDSRVGYGSVGLVGGDPASSP 166


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 610 CRSVMRTPPQYCSNPYGVIDAIHG 539
           C S  +  PQY  +PY      HG
Sbjct: 42  CYSPPQVAPQYPQHPYAAPAPGHG 65


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 610 CRSVMRTPPQYCSNPYGVIDAIHG 539
           C S  +  PQY  +PY      HG
Sbjct: 42  CYSPPQVAPQYPQHPYAAPAPGHG 65


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 610 CRSVMRTPPQYCSNPYGVIDAIHG 539
           C S  +  PQY  +PY      HG
Sbjct: 42  CYSPPQVAPQYPQHPYAAPAPGHG 65


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 419 RSGSRKISSQSLYAFFNF 366
           R+  R +SS S+YA+F F
Sbjct: 75  RTTFRWLSSTSIYAYFIF 92


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 419 RSGSRKISSQSLYAFFNF 366
           R+  R +SS S+YA+F F
Sbjct: 75  RTTFRWLSSTSIYAYFIF 92


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 610 CRSVMRTPPQYCSNPYGVIDAIHG 539
           C S  +  PQY  +PY      HG
Sbjct: 42  CYSPPQVAPQYPQHPYAAPAPGHG 65


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 610 CRSVMRTPPQYCSNPYGVIDAIHG 539
           C S  +  PQY  +PY      HG
Sbjct: 42  CYSPPQVAPQYPQHPYAAPAPGHG 65


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 610 CRSVMRTPPQYCSNPYGVIDAIHG 539
           C S  +  PQY  +PY      HG
Sbjct: 42  CYSPPQVAPQYPQHPYAAPAPGHG 65


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 610 CRSVMRTPPQYCSNPYGVIDAIHG 539
           C S  +  PQY  +PY      HG
Sbjct: 42  CYSPPQVAPQYPQHPYAAPAPGHG 65


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 610 CRSVMRTPPQYCSNPYGVIDAIHG 539
           C S  +  PQY  +PY      HG
Sbjct: 42  CYSPPQVAPQYPQHPYAAPAPGHG 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,132
Number of Sequences: 336
Number of extensions: 2679
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)