Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P11
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    44   1e-04
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    39   0.003
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    37   0.014
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    35   0.058
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    32   0.41 
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    32   0.41 
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    31   0.94 
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    30   1.2  
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF106577-10|AAC78189.1|  796|Caenorhabditis elegans Hypothetical...    28   6.7  
U80025-2|AAD32270.3|  806|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical ...    27   8.8  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +3

Query: 501 RITGSRPANPREWPWMASITPYGFEQYCGGVLITDRHVLTAAHC 632
           R+ G   ++P  WPW   +        CGG LI    VLTAAHC
Sbjct: 57  RLIGGSESSPHSWPWTVQLLSRLGHHRCGGSLIDPNFVLTAAHC 100


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
 Frame = +3

Query: 432 DEILLKINRAENRGCGL-STRAQGRITGS--RPANPREW-PWMASITPYG----FEQYCG 587
           + + +  N  ++  CG  ST     +T +     NP    PW   I        FE  CG
Sbjct: 4   ENVDINSNNLDDELCGRQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICG 63

Query: 588 GVLITDRHVLTAAHC 632
           G LIT +HVLTAAHC
Sbjct: 64  GTLITLKHVLTAAHC 78


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
 Frame = +3

Query: 453 NRAENRGCGLSTRAQGRITGSRPANPREWPWMASITPYG--------FEQYCGGVLITDR 608
           N      CG + ++  +I   R A   E PW   I  Y         + ++C G L + R
Sbjct: 26  NEKRLEDCGKNVKS--KIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPR 83

Query: 609 HVLTAAHC 632
           H+LTA HC
Sbjct: 84  HILTATHC 91


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 34.7 bits (76), Expect = 0.058
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 501 RITGSRPANPREWPWMASITPYGFE-QYCGGVLITDRHVLTAAHC 632
           R+ G     P  +PW A++     +  +CG  ++   H++TAAHC
Sbjct: 26  RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHC 70


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 561 PYGFEQYCGGVLITDRHVLTAAHCTXRWD 647
           P G    CGGVLI    V+T+AHC    D
Sbjct: 39  PDGTTNVCGGVLIAPSIVITSAHCVFSGD 67


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +3

Query: 501 RITGSRPANPREWPWMASITPYGFEQY----CGGVLITDRHVLTAAHC 632
           ++   R A+  E PW      Y  ++     C G +++ RH+L A HC
Sbjct: 162 KVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC 209


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 531 REWPWMASITPYGFEQYCGGVLITDRHVLTAAH 629
           + +PW  S T  G  +  GG +I+  H++TAAH
Sbjct: 26  KNFPWAVSFTVDGVNRL-GGSIISPYHIITAAH 57


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +3

Query: 543 WMASITPYGFEQY---CGGVLITDRHVLTAAHC 632
           WMA +  YG       CG  +I D  ++TAAHC
Sbjct: 50  WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC 82


>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical protein
            F31C3.3 protein.
          Length = 2029

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 543  WMASITPYGFEQYCGGVLITDRHVLTAAH 629
            WM+  +PYGF+ +  G+ +T     T +H
Sbjct: 1174 WMSHSSPYGFQVFSDGLQLTSSFRQTVSH 1202


>AF106577-10|AAC78189.1|  796|Caenorhabditis elegans Hypothetical
           protein F46F5.11 protein.
          Length = 796

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +3

Query: 267 HCIQEDFKKDYLVFMDYVCVIERSSIGVCCPEN--EVKEGIEALAGDLPATAPKNEDDEI 440
           H   +DFK +  V+ D   +I+      C PEN  +++  I+ L  DL       E D +
Sbjct: 321 HNYLKDFKDEKQVYEDSGRMIDYLHNWKCSPENSKQIENCIKQLVNDLVKVKLWGEQDAV 380

Query: 441 LLKINRAE 464
           L ++  A+
Sbjct: 381 LTELFLAD 388


>U80025-2|AAD32270.3|  806|Caenorhabditis elegans Hypothetical
           protein F02C9.2 protein.
          Length = 806

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +3

Query: 267 HCIQEDFKKDYLVFMDYVCVIERSSIGVCCPENEVKEGIEALAGDLPATAPKNEDDEILL 446
           H   +DFK +  V+ D   +IE      C   + ++  I  LA DL       E+DE L+
Sbjct: 335 HNYLKDFKDEQQVYEDSGRIIEFLHNWNCKTGSSIQSCIVQLANDLVEVKLLGEEDESLM 394

Query: 447 KI 452
           ++
Sbjct: 395 EM 396


>AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical
           protein ZK105.3 protein.
          Length = 802

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +3

Query: 267 HCIQEDFKKDYLVFMDYVCVIERSSIGVCCPEN--EVKEGIEALAGDLPATAPKNEDDEI 440
           H   +DFK +  V+ D   +IE      C PEN  +++  ++ LA DL       ++D +
Sbjct: 324 HDYLKDFKDEKQVYEDSGKMIEYLHDWKCAPENSSDLERCVKQLANDLVEVKLWGKEDAM 383

Query: 441 LLKI 452
           L ++
Sbjct: 384 LTEM 387


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,777,206
Number of Sequences: 27780
Number of extensions: 279287
Number of successful extensions: 687
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)