Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P10
         (802 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...   219   1e-57
Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical pr...    95   4e-20
AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical ...    31   1.3  
Z81036-2|CAD30433.1|  431|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z81036-1|CAB02742.1|  473|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score =  219 bits (536), Expect = 1e-57
 Identities = 107/234 (45%), Positives = 146/234 (62%), Gaps = 1/234 (0%)
 Frame = +1

Query: 100 GYASPLXAFNNGPREXLLYVVCVRPNK-NKQDYLATVDVDSKSATYGQVIHRTYTGVTGD 276
           GYASP  A   GPRE +L+V    PN  +  D + TVDV+ +S T+ QVI R      GD
Sbjct: 14  GYASPADAIK-GPREEVLFVTA--PNAADGPDAIFTVDVNPESDTFCQVISRVDVPHIGD 70

Query: 277 ELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSF 456
           E+HH+GWN CSSCHD    KR  LI+P L+S  +Y ++V  + RK  L   I+ SK+ S 
Sbjct: 71  EVHHTGWNACSSCHDKPTEKRSHLIVPCLNSDRIYIINVENE-RKIYLEHTIEPSKLHSL 129

Query: 457 NCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNLAKFGYDFW 636
           N SFPHT+HCLA G IMIST+G+ N    G+F+L+D KT E  GTW   +    F YDFW
Sbjct: 130 NLSFPHTSHCLADGNIMISTLGEANGTPSGNFLLLDGKTFEPKGTWPADEKTVPFNYDFW 189

Query: 637 YQPYHDVMISSXWGTPKYFKSGFHAXXISDPXRYGTKLNVYKWSTRELQQVIXL 798
           YQP  +VMIS+ WG+P + K GF+   + +   YG  +++++W +++  Q I L
Sbjct: 190 YQPRRNVMISTEWGSPNHIKKGFNPAHVGE-GLYGNSVHIFEWDSKKYLQTIDL 242


>Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical
           protein R11G10.2 protein.
          Length = 576

 Score = 95.5 bits (227), Expect = 4e-20
 Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
 Frame = +1

Query: 142 EXLLYVVCVRPNKNKQDYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGW-NVCSSCH 318
           E    V C      ++D +A VD+D  S T+  ++   +    GDE     W     S  
Sbjct: 90  ELFAIVCCPHSIGYERDKIALVDLDPTSETFCTILSEVHLTSNGDEPGRMNWAKSAESLG 149

Query: 319 DNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSFNCSFPHTTHCLAT- 495
           +     R  +I+P ++S  +Y +    +  K  + K I   ++   + S P+    L   
Sbjct: 150 EMNKFVRRNIIVPCMNSGKIYVI--AFENEKLWIEKEIRNDELIRKDVSCPYAVRSLPLK 207

Query: 496 -GEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNLAKFGYDFWYQPYHDVMISSX 672
              + +ST+GD   NGKGDF+LID +T EV          + +G DF  QP H++MISS 
Sbjct: 208 GAPVHVSTLGDRFGNGKGDFILIDRRTWEVRK--KSEPTFSDYGGDFSLQPRHNLMISSE 265

Query: 673 WGTPKYFKSGFHAXXISD-PXRYGTKLNVYKWSTRELQQVIXL 798
           WG P+  + GF    + +    +G +L+V++ S  +L Q I L
Sbjct: 266 WGHPRLLRDGFMPSELENVSESFGARLHVWQISPPKLIQSINL 308


>AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical
           protein Y48A5A.1 protein.
          Length = 431

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
 Frame = +1

Query: 412 PRLHKVIDGSKMRSFN-CSFPHTTHCLATGEIMISTMGDENENGKGD---FVLIDSKTLE 579
           P++HK    S +        P TTH    G  ++  M D  ++ +GD   F++      E
Sbjct: 79  PKMHKKEHFSNLDMITELLTPSTTHHQPHGNQLVEEMDDSEDDDEGDGSEFLVEQQPAAE 138

Query: 580 VTGTWTKGKNLAKFGYDFWYQPY 648
                + GK + KFGY F +  +
Sbjct: 139 PEEPKSDGK-IEKFGYGFGWSKF 160


>Z81036-2|CAD30433.1|  431|Caenorhabditis elegans Hypothetical
           protein C16C2.2b protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 553 VLIDSKTLEVT-GTWTKGKNLAKFGYDFWYQPYHDVMISSXWGTPKYFKSGFHAXXISDP 729
           V +D++TL+ T    +K K+ ++  + F++   H   + +    P++ +S  +   ++  
Sbjct: 351 VNVDNRTLDQTLECISKAKDASQMRFAFYHSEEHVFTLMAKDSYPRFVRSQIYKAVLTAA 410

Query: 730 XRYGTK 747
            ++GTK
Sbjct: 411 QQHGTK 416


>Z81036-1|CAB02742.1|  473|Caenorhabditis elegans Hypothetical
           protein C16C2.2a protein.
          Length = 473

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 553 VLIDSKTLEVT-GTWTKGKNLAKFGYDFWYQPYHDVMISSXWGTPKYFKSGFHAXXISDP 729
           V +D++TL+ T    +K K+ ++  + F++   H   + +    P++ +S  +   ++  
Sbjct: 351 VNVDNRTLDQTLECISKAKDASQMRFAFYHSEEHVFTLMAKDSYPRFVRSQIYKAVLTAA 410

Query: 730 XRYGTK 747
            ++GTK
Sbjct: 411 QQHGTK 416


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,556,917
Number of Sequences: 27780
Number of extensions: 364343
Number of successful extensions: 806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)