Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_P09
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical ... 39 0.004
AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical ... 35 0.063
AF039040-4|AAB94182.1| 368|Caenorhabditis elegans Hypothetical ... 34 0.11
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68333-4|CAA92723.2| 271|Caenorhabditis elegans Hypothetical pr... 29 4.1
AC006742-8|ABB51175.1| 261|Caenorhabditis elegans Hypothetical ... 28 7.2
AC006742-2|AAF60497.3| 261|Caenorhabditis elegans Hypothetical ... 28 7.2
Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical p... 27 9.6
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AF003383-1|AAB54234.1| 379|Caenorhabditis elegans Hypothetical
protein ZC250.2 protein.
Length = 379
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 310 ITKTSVDDIELNKNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQ 489
I K S+ + + +I+ +++ + VKT + + RL ++ TW +D +
Sbjct: 138 IVKCSIPFPKTSNSISDSEVHVMVKTFEGHHVNRLEVLKNTWA----------SDVSRIE 187
Query: 490 HQNQTNGHMVNT-NCSASHQRKHLCCKMSVEYDRFLES---GKKWFCHFDDDNYVNVPRL 657
+ + + T N + + C K + RFL S G KW DDD +N RL
Sbjct: 188 YCSDKEDPAIPTINLGVDNTDRGHCAKTWEIFRRFLGSSGNGAKWLVVADDDTLMNFKRL 247
Query: 658 VSVLQTY 678
+L+ Y
Sbjct: 248 KQMLELY 254
>AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical
protein C02H6.1 protein.
Length = 334
Score = 34.7 bits (76), Expect = 0.063
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
Frame = +1
Query: 325 VDDIELNKNI-TLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQ 501
++D E ++ T +F V+T+K Y R+P + TW +F +T +
Sbjct: 72 IEDSEATYDLPTSGQLFCFVETSKKYFNDRVPSMASTWLPRCDNGRFFL---KTPLVDEK 128
Query: 502 TNGHMVNTNCSASHQRKHLCCKMSVEYD-RFLESGKKWFCHFDDDNYVNVPRLVSVLQT 675
V N S+ +S Y ++ W+ DDDNY + L L T
Sbjct: 129 IPFSTVYRNLEDSYYDLFRKTLLSFYYSYTYISKDFDWYLKADDDNYFMIDHLKEYLDT 187
>AF039040-4|AAB94182.1| 368|Caenorhabditis elegans Hypothetical
protein T22B11.2 protein.
Length = 368
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +1
Query: 385 TTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASHQRKHLCC 564
TT Y TR+P I +TW + + FT+++ + + T H V S+ +
Sbjct: 104 TTSIYHKTRVPAITETWLRRC-DAGHLFTNSDRFLNAS-TPYHTVFDGLPESYYKLFWKT 161
Query: 565 KMSVEY-DRFLESGKKWFCHFDDDNYVNVPRLVSVLQT 675
++++ Y +++ W+ DDD Y+ V L L T
Sbjct: 162 RLALLYIYKYVSKDFDWYFKGDDDTYLIVENLQRYLAT 199
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -2
Query: 305 SIDRSATCTTPARLSWKLKLTPPWYTNKLQYPKANSTAAALSXLRPPIPKQ 153
S++ S+ T P+ + + PP Y +P + A S PP P Q
Sbjct: 193 SLNTSSISTEPSPVQTSILKPPPMYPETASFPHRKIRSGAYSLYPPPQPSQ 243
>Z68333-4|CAA92723.2| 271|Caenorhabditis elegans Hypothetical
protein C05C12.4 protein.
Length = 271
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 331 DIELNKNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQN 498
++ NK+ + + S ++Y RL I++ F + E W FT + KQH N
Sbjct: 137 EVVYNKSDSFFKVVGSKSCKIFWEYRRLVILVL--FAIILEMAWRFTKKQQKQHAN 190
>AC006742-8|ABB51175.1| 261|Caenorhabditis elegans Hypothetical
protein Y38C1AB.1 protein.
Length = 261
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/104 (23%), Positives = 40/104 (38%)
Frame = +1
Query: 367 IFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASHQ 546
I + T TR IL+TW Q + FFTD++ ++N S H
Sbjct: 22 ILCLIHTATPSHETRAKTILETWVQHC-DDFLFFTDSKMNDSIPHIYYPLLN---SRDHS 77
Query: 547 RKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTY 678
+ + D+ + W+ DDD Y + + ++L Y
Sbjct: 78 WEKIRRVFKYVRDKITKK-YDWYYRADDDTYALMHNMRTLLDNY 120
>AC006742-2|AAF60497.3| 261|Caenorhabditis elegans Hypothetical
protein Y38C1AB.5 protein.
Length = 261
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/104 (23%), Positives = 40/104 (38%)
Frame = +1
Query: 367 IFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASHQ 546
I + T TR IL+TW Q + FFTD++ ++N S H
Sbjct: 22 ILCLIHTATPSHETRAKTILETWVQHC-DDFLFFTDSKMNDSIPHIYYPLLN---SRDHS 77
Query: 547 RKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTY 678
+ + D+ + W+ DDD Y + + ++L Y
Sbjct: 78 WEKIRRVFKYVRDKITKK-YDWYYRADDDTYALMHNMRTLLDNY 120
>Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical
protein T09E11.12 protein.
Length = 323
Score = 27.5 bits (58), Expect = 9.6
Identities = 25/103 (24%), Positives = 38/103 (36%)
Frame = +1
Query: 367 IFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASHQ 546
+F V+T++ Y R+P I TW + + FF+ T + N S S
Sbjct: 80 LFCFVETSERYMDERVPSIASTWLRRC-DNGRFFSKTPLLNLNITYSTVYKNLEDSYSDL 138
Query: 547 RKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQT 675
+ Y +S W+ DDD Y + L L T
Sbjct: 139 FRKSIFGFYYSYVHISKS-FDWYLKADDDTYFAMDHLREYLNT 180
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 293 SATCTTPARLSWKLKLTPPWYTNKLQYPKANST 195
+ T TTP + K+K+ P YT+ L+ P A+++
Sbjct: 87 TTTTTTPEPTTTKVKVCPQGYTSFLRTPAADNS 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,719,981
Number of Sequences: 27780
Number of extensions: 285932
Number of successful extensions: 842
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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