Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P06
         (806 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    26   0.47 
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    26   0.47 
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   4.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.8  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +1

Query: 196 KVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWD 330
           K  TP+  L  Q +G       L        IAT ++ N V+LWD
Sbjct: 46  KNDTPKELLDGQFRGEFPQDERLMCYMKCIMIATKAMKNDVILWD 90


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +1

Query: 196 KVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWD 330
           K  TP+  L  Q +G       L        IAT ++ N V+LWD
Sbjct: 20  KNDTPKELLDGQFRGEFPQDERLMCYMKCIMIATKAMKNDVILWD 64


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 268 YNPNDQQIATSSLDNSVLLWDLRGTMRS 351
           YNP    +A   ++  VLL  +RG  +S
Sbjct: 121 YNPQVDFVADYKIEGKVLLLPVRGAGKS 148


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 416 WHLRLVIKQSESGYRLLLGARACSKHIRRLCAQC 517
           W  + VIK  E GYR L     C + I +L   C
Sbjct: 842 WSNQDVIKSIEKGYR-LPAPMDCPEAIYQLMLDC 874


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,385
Number of Sequences: 438
Number of extensions: 4108
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)