Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P05
         (373 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_02_0115 - 11248021-11248101,11249017-11249118                       52   1e-07
05_07_0185 - 28257291-28257616,28258202-28258469,28258580-28260061     29   1.5  
05_03_0661 - 16726958-16726966,16727133-16727234                       28   2.7  
06_03_0336 + 19671500-19672150,19672681-19673301                       27   3.6  
02_04_0206 + 20916063-20919669,20919816-20920014,20920935-209210...    27   4.7  
01_06_0529 - 30026101-30026277,30026363-30026438,30026509-300265...    26   8.2  

>01_02_0115 - 11248021-11248101,11249017-11249118
          Length = 60

 Score = 52.4 bits (120), Expect = 1e-07
 Identities = 23/34 (67%), Positives = 26/34 (76%)
 Frame = +2

Query: 104 NGIKKPRXPRHASTLGMDPKFLRNQRFCKKGNLK 205
           NGIKKP+  R  ST GMDPKFLRNQR+ +K N K
Sbjct: 19  NGIKKPKRHRQTSTKGMDPKFLRNQRYSRKHNKK 52



 Score = 27.9 bits (59), Expect = 2.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 49  MAKSNHHPNHXQNRKAHSQWYQKAK 123
           MAKS +H  H Q+ KAH    +K K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPK 25


>05_07_0185 - 28257291-28257616,28258202-28258469,28258580-28260061
          Length = 691

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 113 KKPRXPRHASTLGMDPKFLRNQ-RFCKKG 196
           +KP  PR    L +  +F+R+Q + CKKG
Sbjct: 454 RKPTKPRQRGKLKLQSQFIRDQNKICKKG 482


>05_03_0661 - 16726958-16726966,16727133-16727234
          Length = 36

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 49  MAKSNHHPNHXQNRKAHSQWYQKAK 123
           MAKS +H  H Q+ KAH    +K K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPK 25


>06_03_0336 + 19671500-19672150,19672681-19673301
          Length = 423

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 148 WHGSKIFKESKVLQEG*PEASQATREGG 231
           WH    FK S+    G PEA+ A  EGG
Sbjct: 223 WHEINQFKSSEKSLVGMPEAAAAEEEGG 250


>02_04_0206 + 20916063-20919669,20919816-20920014,20920935-20921074,
            20921184-20921263,20922759-20922875,20923089-20923136,
            20923509-20923601,20923881-20923958,20924114-20924218,
            20924543-20925212,20925253-20925350,20925887-20925963,
            20926035-20926117,20926208-20926287,20927060-20927139,
            20927698-20927743,20928709-20929181,20929234-20929579
          Length = 2139

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 6/25 (24%)
 Frame = -3

Query: 194  PSCKT------FDSLKILDPCQGWM 138
            P+C+T      F+S+K+L PC+ WM
Sbjct: 1448 PNCRTEKLYSYFESIKLLFPCEQWM 1472


>01_06_0529 -
           30026101-30026277,30026363-30026438,30026509-30026570,
           30026882-30027031,30027213-30027338,30028096-30028305,
           30028870-30028938,30029024-30029080,30029131-30029277,
           30029358-30029542,30029623-30029698,30029796-30029918,
           30030395-30030410,30031743-30032745,30033521-30033789,
           30034297-30034415
          Length = 954

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 37  KRIKMAKSNHHPNHXQNRKAHSQWYQKAKE 126
           +++K AKS+H   H Q    H Q YQ+  E
Sbjct: 345 QKLKAAKSHHQAGH-QETNTHIQVYQQLTE 373


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,360,544
Number of Sequences: 37544
Number of extensions: 125739
Number of successful extensions: 308
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)