Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P05
         (373 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical pr...    35   0.021
AF022972-3|AAC48235.2|  526|Caenorhabditis elegans Udp-glucurono...    27   4.3  
U13642-5|AAG00036.1|  169|Caenorhabditis elegans Hypothetical pr...    26   7.5  
AF144639-1|AAD44756.1|  552|Caenorhabditis elegans sphingosine-1...    26   7.5  
AF100673-6|AAC69001.1|  552|Caenorhabditis elegans Sphingosine p...    26   7.5  
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    26   9.9  
AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical...    26   9.9  

>Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical
           protein B0513.3 protein.
          Length = 62

 Score = 34.7 bits (76), Expect = 0.021
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 104 NGIKKPRXPRHASTLGMDPKFLRNQRFCKKGN 199
           NGI KP+     S  G+D KF++N RF +K N
Sbjct: 19  NGITKPKKHIFLSMKGVDAKFIKNLRFSRKNN 50



 Score = 33.9 bits (74), Expect = 0.037
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 49  MAKSNHHPNHXQNRKAHSQWYQKAKE 126
           MAKS +H NH QN+KAH     K K+
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGITKPKK 26


>AF022972-3|AAC48235.2|  526|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein40 protein.
          Length = 526

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -2

Query: 192 FLQNL*FLKNFGSMPRVDACLGFLGFL--IPLTVSFAVLVMIWMMI*LCHF 46
           FL+++ F   FG +P +D     +GF+    + ++F VL ++  ++ + +F
Sbjct: 460 FLKHVEFAARFGKLPSLDPYSRQMGFIQYFLIDIAFIVLTVVLTIVSVLYF 510


>U13642-5|AAG00036.1|  169|Caenorhabditis elegans Hypothetical
           protein ZC395.4 protein.
          Length = 169

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +2

Query: 89  AKLTVNGIKKPRXPRHASTLGMDPKFLRNQRFCKKGNLKPAKQ 217
           AK TV G+K+ + P + +   +D  F + ++   KGN K A +
Sbjct: 105 AKRTVTGMKESKDPEYVT---LDDDFPKFEKAILKGNSKEATE 144


>AF144639-1|AAD44756.1|  552|Caenorhabditis elegans
           sphingosine-1-phosphate lyase protein.
          Length = 552

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 168 KNFGSMPRVDACLGFLGFLIPLTVSFAVLVMIW 70
           K +G    VDACLG  GF+IP       L+ ++
Sbjct: 301 KKYGIPVHVDACLG--GFMIPFMNDAGYLIPVF 331


>AF100673-6|AAC69001.1|  552|Caenorhabditis elegans Sphingosine
           phosphate lyase protein1 protein.
          Length = 552

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 168 KNFGSMPRVDACLGFLGFLIPLTVSFAVLVMIW 70
           K +G    VDACLG  GF+IP       L+ ++
Sbjct: 301 KKYGIPVHVDACLG--GFMIPFMNDAGYLIPVF 331


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical protein
            C09G5.6 protein.
          Length = 948

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 37   KRIKMAKSNHHPNHXQNRKAHSQWYQKAKEXQARIHPWHGSKIFKESKV-LQEG*PEAS 210
            K   M K +  PN  Q +    QW +  K  + R    HG ++  E+ V +Q+  PE+S
Sbjct: 843  KERAMEKHHKKPNKFQEK----QWEEHRKSQELRNSREHGGQVPVETSVPMQQVKPESS 897


>AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical
           protein Y47H9C.14 protein.
          Length = 87

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 55  KSNHHPNHXQNRKAHSQWYQKAKE 126
           K  +H NH +N KAH     K K+
Sbjct: 14  KPENHTNHNRNNKAHRNGITKPKK 37



 Score = 25.8 bits (54), Expect = 9.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 104 NGIKKPRXPRHASTLGMDPKFLRNQRFCKKGN 199
           NGI KP+     S  G   +F+++ RF +K N
Sbjct: 30  NGITKPKKHIFLSIEGSRRQFIKSLRFFRKNN 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,111,991
Number of Sequences: 27780
Number of extensions: 102363
Number of successful extensions: 287
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)