Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_O24
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    27   0.21 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    27   0.21 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.0  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 529 VNVIAAISELITIMFDLTVL*CCFYVLYVKGIKE*LLFI 413
           VN++  +S L+TI+  LTV    F+  Y  G K   LFI
Sbjct: 142 VNILIHLSGLVTIVATLTVT-IIFFASYQYGTKTYSLFI 179


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 529 VNVIAAISELITIMFDLTVL*CCFYVLYVKGIKE*LLFI 413
           VN++  +S L+TI+  LTV    F+  Y  G K   LFI
Sbjct: 142 VNILIHLSGLVTIVATLTVT-IIFFASYQYGTKTYSLFI 179


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 598 IVLEPSPQQFTNLWYFFLQWATQVNV 521
           +V+ P  QQ  + WY+ + W+  ++V
Sbjct: 617 LVINPH-QQHLDAWYWVMDWSDMLSV 641


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 610 EIVTIVLEPSPQQFTNLWYFFLQWATQVNVIAAISELITIM 488
           ++V I L  +  QFT   +F L W     +IAA++  + I+
Sbjct: 329 QLVAIRLLNTKLQFTAKDFFNLDWTFCHMMIAALTTYLVIL 369


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 307 SILIYLCFPIACLI 266
           SILI+  FP+A LI
Sbjct: 241 SILIFFIFPLAILI 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,377
Number of Sequences: 336
Number of extensions: 4674
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)