Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_O24
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015183-1|AAH15183.1| 238|Homo sapiens alkB, alkylation repair... 105 2e-22
AK095523-1|BAC04566.1| 224|Homo sapiens protein ( Homo sapiens ... 89 2e-17
BC105801-1|AAI05802.1| 258|Homo sapiens ALKBH6 protein protein. 46 1e-04
AB273714-1|BAF63844.1| 238|Homo sapiens alkylation repair homol... 46 1e-04
BC017096-1|AAH17096.1| 302|Homo sapiens alkB, alkylation repair... 33 0.83
BC002820-1|AAH02820.1| 302|Homo sapiens alkB, alkylation repair... 33 0.83
AK222689-1|BAD96409.1| 302|Homo sapiens hypothetical protein FL... 33 0.83
AK000020-1|BAA90888.1| 302|Homo sapiens protein ( Homo sapiens ... 33 0.83
AK026097-1|BAB15358.1| 229|Homo sapiens protein ( Homo sapiens ... 31 3.3
>BC015183-1|AAH15183.1| 238|Homo sapiens alkB, alkylation repair
homolog 8 (E. coli) protein.
Length = 238
Score = 105 bits (252), Expect = 2e-22
Identities = 71/227 (31%), Positives = 116/227 (51%), Gaps = 12/227 (5%)
Frame = +2
Query: 11 MRKHEKK--RKRFAARLNTLK--GIVCYEDPRPNVILCNVGQATGFDKQKLLKLLTEYKV 178
+ K EKK RK+ A+ L+ GI ++++ N G G + +LL +L + +
Sbjct: 11 LSKTEKKFLRKQIKAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGL 70
Query: 179 NTPLPKFVAEKGESYSYLMFDKAENASLFYEACNGKAQVDENGT--TLYVTFVENVPDTD 352
L + + YS+ + E + Y NGK VD+ G TLY+ FVE V +
Sbjct: 71 VDAL---LMPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFVEKVQWKE 127
Query: 353 IICKHPNPKGLHIIPDFLTEDEEKLFLNTFNI------QHVETTLKNRQVKHYGYEFRYG 514
+ P GL ++ + ++ +EEK+ L + + Q+ + +LK+R+VKH+GYEF Y
Sbjct: 128 LR-PQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYE 186
Query: 515 SNDVDLSCPLQEKIPKICKLLWRRLQHYGYDLGVPVQLTVNKYLPGQ 655
+N+VD PL +P IC+ + GY P Q+T+N+Y PGQ
Sbjct: 187 NNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQ 233
>AK095523-1|BAC04566.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ38204 fis, clone FCBBF1000412. ).
Length = 224
Score = 89.0 bits (211), Expect = 2e-17
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Frame = +2
Query: 11 MRKHEKK--RKRFAARLNTLK--GIVCYEDPRPNVILCNVGQATGFDKQKLLKLLTEYKV 178
+ K EKK RK+ A+ L+ GI ++++ N G G + +LL +L + +
Sbjct: 11 LSKTEKKFLRKQIKAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGL 70
Query: 179 NTPLPKFVAEKGESYSYLMFDKAENASLFYEACNGKAQVDENGT--TLYVTFVENVPDTD 352
L + + YS+ + E + Y NGK VD+ G TLY+ FVE V +
Sbjct: 71 VDAL---LMPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFVEKVQWKE 127
Query: 353 IICKHPNPKGLHIIPDFLTEDEEKLFLNTFNI------QHVETTLKNRQVKHYGYEFRYG 514
+ P GL ++ + ++ +EEK+ L + + Q+ + +LK+R+VKH+GYEF Y
Sbjct: 128 LR-PQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYE 186
Query: 515 SNDVDLSCPLQEKIPKICKLL---WRRLQHYGYDLGV 616
+N+VD PL +P IC+ W R ++G+
Sbjct: 187 NNNVDKDKPLSGGLPDICESFLERWLRKAEKNLEVGI 223
>BC105801-1|AAI05802.1| 258|Homo sapiens ALKBH6 protein protein.
Length = 258
Score = 46.4 bits (105), Expect = 1e-04
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +2
Query: 374 PKGLHIIPDFLTEDEEKLFLN-TFNIQHVE-TTLKNRQVKHYG-YEFRYGSNDVDLSCPL 544
P ++ +PDF++++EE+ L FN + T L R+++++G G L L
Sbjct: 40 PPVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWL 99
Query: 545 QEKIPKICKLLWRRLQHYGYDLGVPVQ-LTVNKYLPGQGIPSHVDKHSPFGETILALSLG 721
Q + K+ L +G G+P + VN+YLPG+GI H D + T+ +SLG
Sbjct: 100 QRYVDKVSNL-----SLFG---GLPANHVLVNQYLPGEGIMPHED-GPLYYPTVSTISLG 150
Query: 722 SDVVMDW 742
S V+D+
Sbjct: 151 SHTVLDF 157
>AB273714-1|BAF63844.1| 238|Homo sapiens alkylation repair homolog
6 isoform 3 protein.
Length = 238
Score = 46.4 bits (105), Expect = 1e-04
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +2
Query: 374 PKGLHIIPDFLTEDEEKLFLN-TFNIQHVE-TTLKNRQVKHYG-YEFRYGSNDVDLSCPL 544
P ++ +PDF++++EE+ L FN + T L R+++++G G L L
Sbjct: 20 PPVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWL 79
Query: 545 QEKIPKICKLLWRRLQHYGYDLGVPVQ-LTVNKYLPGQGIPSHVDKHSPFGETILALSLG 721
Q + K+ L +G G+P + VN+YLPG+GI H D + T+ +SLG
Sbjct: 80 QRYVDKVSNL-----SLFG---GLPANHVLVNQYLPGEGIMPHED-GPLYYPTVSTISLG 130
Query: 722 SDVVMDW 742
S V+D+
Sbjct: 131 SHTVLDF 137
>BC017096-1|AAH17096.1| 302|Homo sapiens alkB, alkylation repair
homolog 4 (E. coli) protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.83
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 380 GLHIIPDFLTEDEEKLFLNTFNIQHVETTLKNRQVKHYG--YEFRYGSNDVDLSCPLQEK 553
G+ +I DF+T +EE + + + + R+ + YG FR + C L
Sbjct: 72 GVMLIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFRKQKLKTEGFCGL--- 128
Query: 554 IPKICKLLWRRLQHY-GYDLGVPVQLTVNKYLP--GQGIPSHVDKHSPFGETILALSLGS 724
P + + RR+ Y G + PV+ Y P G I H+D +GE +++L+L S
Sbjct: 129 -PSFSREVVRRMGLYPGLEGFRPVEQCNLDYCPERGSAIDPHLDDAWLWGERLVSLNLLS 187
Query: 725 DVVM 736
V+
Sbjct: 188 PTVL 191
>BC002820-1|AAH02820.1| 302|Homo sapiens alkB, alkylation repair
homolog 4 (E. coli) protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.83
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 380 GLHIIPDFLTEDEEKLFLNTFNIQHVETTLKNRQVKHYG--YEFRYGSNDVDLSCPLQEK 553
G+ +I DF+T +EE + + + + R+ + YG FR + C L
Sbjct: 72 GVMLIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFRKQKLKTEGFCGL--- 128
Query: 554 IPKICKLLWRRLQHY-GYDLGVPVQLTVNKYLP--GQGIPSHVDKHSPFGETILALSLGS 724
P + + RR+ Y G + PV+ Y P G I H+D +GE +++L+L S
Sbjct: 129 -PSFSREVVRRMGLYPGLEGFRPVEQCNLDYCPERGSAIDPHLDDAWLWGERLVSLNLLS 187
Query: 725 DVVM 736
V+
Sbjct: 188 PTVL 191
>AK222689-1|BAD96409.1| 302|Homo sapiens hypothetical protein
FLJ20013 variant protein.
Length = 302
Score = 33.5 bits (73), Expect = 0.83
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 380 GLHIIPDFLTEDEEKLFLNTFNIQHVETTLKNRQVKHYG--YEFRYGSNDVDLSCPLQEK 553
G+ +I DF+T +EE + + + + R+ + YG FR + C L
Sbjct: 72 GVMLIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFRKQKLKTEGFCGL--- 128
Query: 554 IPKICKLLWRRLQHY-GYDLGVPVQLTVNKYLP--GQGIPSHVDKHSPFGETILALSLGS 724
P + + RR+ Y G + PV+ Y P G I H+D +GE +++L+L S
Sbjct: 129 -PSFSREVVRRMGLYPGLEGFRPVEQCNLDYCPERGSAIDPHLDDAWLWGERLVSLNLLS 187
Query: 725 DVVM 736
V+
Sbjct: 188 PTVL 191
>AK000020-1|BAA90888.1| 302|Homo sapiens protein ( Homo sapiens
cDNA FLJ20013 fis, clone ADKA03455. ).
Length = 302
Score = 33.5 bits (73), Expect = 0.83
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 380 GLHIIPDFLTEDEEKLFLNTFNIQHVETTLKNRQVKHYG--YEFRYGSNDVDLSCPLQEK 553
G+ +I DF+T +EE + + + + R+ + YG FR + C L
Sbjct: 72 GVMLIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFRKQKLKTEGFCGL--- 128
Query: 554 IPKICKLLWRRLQHY-GYDLGVPVQLTVNKYLP--GQGIPSHVDKHSPFGETILALSLGS 724
P + + RR+ Y G + PV+ Y P G I H+D +GE +++L+L S
Sbjct: 129 -PSFSREVVRRMGLYPGLEGFRPVEQCNLDYCPERGSAIDPHLDDAWLWGERLVSLNLLS 187
Query: 725 DVVM 736
V+
Sbjct: 188 PTVL 191
>AK026097-1|BAB15358.1| 229|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22444 fis, clone HRC09425. ).
Length = 229
Score = 31.5 bits (68), Expect = 3.3
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Frame = +2
Query: 389 IIPDFLTEDEEKLFLNTFNIQHVETTLKNRQVKHYG--YEFRYGSNDVDLSCPLQEKIPK 562
+I DF+T +EE + + + + R+ + YG FR + C L P
Sbjct: 2 LIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFRKQKLKTEGFCGL----PS 57
Query: 563 ICKLLWRRLQHY-GYDLGVPVQLTVNKYLP--GQGIPSHVDKHSPFGETILALSLGSDVV 733
+ + RR+ Y G + PV+ Y P G I H+D +GE +++L+L S V
Sbjct: 58 FSREVVRRMGLYPGLEGFRPVEQCNLDYCPERGSAIDPHLDDAWLWGERLVSLNLLSPTV 117
Query: 734 M 736
+
Sbjct: 118 L 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,364,955
Number of Sequences: 237096
Number of extensions: 2822972
Number of successful extensions: 4880
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4870
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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