Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_O14
         (428 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54ZE9 Cluster: Putative uncharacterized protein; n=2; ...    34   1.1  
UniRef50_Q86KP3 Cluster: Similar to G-protein-coupled receptor a...    33   1.9  
UniRef50_A5BCB6 Cluster: Putative uncharacterized protein; n=1; ...    32   4.4  
UniRef50_Q4A5S8 Cluster: DNA-directed RNA polymerase subunit bet...    32   5.8  

>UniRef50_Q54ZE9 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 620

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 136 IDNTNKTTFSENKS*LDRIIAPEIPXYTKFYENRWSRFRDS 258
           ID  N+T F+  K  L +++A E P  T FY   W R+R++
Sbjct: 172 IDRKNETGFNRLKE-LRKLVAIEFPKQTNFYFYYWQRYREN 211


>UniRef50_Q86KP3 Cluster: Similar to G-protein-coupled receptor at
           plasma membrane; interactions in two-hybrid system with
           Gpa2p; Gpr1p; n=12; Dictyostelium discoideum|Rep:
           Similar to G-protein-coupled receptor at plasma
           membrane; interactions in two-hybrid system with Gpa2p;
           Gpr1p - Dictyostelium discoideum (Slime mold)
          Length = 1303

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +1

Query: 136 IDNTNKTTFSENKS*LDRIIAPEIPXYTKFYENRWSRFRDSDYISTYILIYKNFSFKDN 312
           ID  N+T F++ K  L +++A E P  T FY   W  +R++  I     + K   F+D+
Sbjct: 403 IDRNNETGFNKLKE-LRKLVAIEFPKQTNFYFYYWKAYREN--IKKLGKVPKKLGFQDD 458


>UniRef50_A5BCB6 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 570

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -1

Query: 185 SSYDLFSENVVLFVLSIINFMTLPDIYWRIIIIDYFS*LRATNCFKDTTDGVIKNHLVS 9
           SS   + +  +L +L  I+   L D+  +  I D F  +    C + T DG+ +NH+ S
Sbjct: 155 SSTVCYIQQTLLLILEDISASILTDMSVKDDIHDKFDLMLLVECARSTKDGITRNHIFS 213


>UniRef50_Q4A5S8 Cluster: DNA-directed RNA polymerase subunit beta';
           n=2; Mycoplasma|Rep: DNA-directed RNA polymerase subunit
           beta' - Mycoplasma synoviae (strain 53)
          Length = 1492

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 202 EIPXYTKFYENRWSRFRDSDYISTYILIYKNFSFK 306
           E+  YTK  E  W  FR S+Y+ST + + K+  FK
Sbjct: 816 ELKHYTKLLERVW--FRYSNYVSTVLDVIKDLGFK 848


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,695,996
Number of Sequences: 1657284
Number of extensions: 4074619
Number of successful extensions: 7783
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7783
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)