Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_O14
         (428 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   5.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   8.7  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    20   8.7  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    20   8.7  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +3

Query: 81  IVYYYYSPIDVGKSHKVDY 137
           I+ +YY PI     H++ +
Sbjct: 130 IIAFYYKPIKTLNGHEIKF 148


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 259 DYISTYILIYKNFSF 303
           +Y   Y+L + NF+F
Sbjct: 151 EYFQMYVLFFVNFAF 165


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 259 DYISTYILIYKNFSF 303
           +Y   Y+L + NF+F
Sbjct: 151 EYFQMYVLFFVNFAF 165


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 57  VSCSQLXKIVYYYYSPIDVGK 119
           +SCS   +  ++ Y PI  G+
Sbjct: 413 LSCSSFFQQFFHCYCPIKFGR 433


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
          protein 2 protein.
          Length = 122

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 21 IFDNAICCVFKAVSCSQ 71
          +FDN + C+ K   C++
Sbjct: 39 LFDNYLQCLLKKGKCNE 55


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
          protein protein.
          Length = 122

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 21 IFDNAICCVFKAVSCSQ 71
          +FDN + C+ K   C++
Sbjct: 39 LFDNYLQCLLKKGKCNE 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,553
Number of Sequences: 336
Number of extensions: 1152
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)