Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_O13
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.8  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 139 AFKKLY-FLKNIV*LIIT*YVIRYTTNSY*T*HVRGTKQLQTATRL 273
           +F K+Y +  NIV + +T Y++  TTN      +R T++L   T+L
Sbjct: 38  SFYKIYKYTYNIVAVSLTAYMVYITTN------LRITQKLSIVTQL 77


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 188 LNT*FATLQTATRLNMSAELNSFKQLLDLICPRN*TATNYKQLLEL 325
           +NT   T +TA    M+     F+  ++ + PR     +  + LE+
Sbjct: 85  INTGGLTFETAAHKIMAGATKRFRNQIEALVPRKLRLADGGKTLEI 130


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory
          receptor candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 56 YSWLHNLLMYCNYFGI 9
          Y+ +H L   C +FG+
Sbjct: 17 YTAIHPLFYVCTFFGL 32


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory
          receptor candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 56 YSWLHNLLMYCNYFGI 9
          Y+ +H L   C +FG+
Sbjct: 17 YTAIHPLFYVCTFFGL 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,017
Number of Sequences: 336
Number of extensions: 2135
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)