Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_O12
         (418 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    24   0.68 
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   4.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   4.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   4.8  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   4.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   4.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.4  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 0.68
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +3

Query: 63  PKRLELLGKXGTRYGASLRKMVKKXEVTQHAKYTCSFCGK 182
           PKR  +      ++  S   ++ +   T    Y+C  CGK
Sbjct: 76  PKRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGK 115


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 193 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 330
           +V+V   GLV     +   + GY   L  +  D+ +  + +  ++N
Sbjct: 8   SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 193 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 330
           +V+V   GLV     +   + GY   L  +  D+ +  + +  ++N
Sbjct: 8   SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 193 NVLVSASGLVSDARGL*QEELGYSPLLLPHHADLLSGGYVK*SNLN 330
           +V+V   GLV     +   + GY   L  +  D+ +  + +  ++N
Sbjct: 8   SVIVVGGGLVGSLCAIFMAKRGYHVTLFEYREDIRTAKFARGRSIN 53


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 4   PADCSVNFCIGXVXQNG 54
           PAD  VN+ +G    NG
Sbjct: 63  PADSMVNYTLGQHHHNG 79


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 4   PADCSVNFCIGXVXQNG 54
           PAD  VN+ +G    NG
Sbjct: 122 PADSMVNYTLGQHHHNG 138


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 4   PADCSVNFCIGXVXQNG 54
           PAD  VN+ +G    NG
Sbjct: 63  PADSMVNYTLGQHHHNG 79


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 4   PADCSVNFCIGXVXQNG 54
           PAD  VN+ +G    NG
Sbjct: 122 PADSMVNYTLGQHHHNG 138


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 118 VKWSKXWK*PNTQSI 162
           +KW K  K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 118 VKWSKXWK*PNTQSI 162
           +KW K  K PNT+++
Sbjct: 286 MKWKKDNKLPNTKNV 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,079
Number of Sequences: 336
Number of extensions: 1747
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)