Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_O10
(795 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 33 0.003
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 33 0.003
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 1.6
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 23 2.8
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 23 2.8
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 23 3.7
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 23 3.7
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 23 3.7
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 22 4.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 6.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 6.5
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 8.6
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 32.7 bits (71), Expect = 0.003
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Frame = +1
Query: 121 PGPTPLPVVGNLISVLWESRKFKCHHLIWQSWSQKYGNLLGLRL---GSINVVVVTGIEL 291
P P P++GNL ++ R + L + KY + L + G +N++ +EL
Sbjct: 34 PQPPAYPIIGNLFDIM---RTPEQMFLADRERGLKYYPIYKLDVCGTGGVNLLNPEDVEL 90
Query: 292 IKEVSNREVFEGRPDGFFYTMRSFGKKLGLVFSDGPTWHRTRRFVLKYLKNFGYNSRFMN 471
+ + + F Y GL+ S GP W + RR +L +F F+
Sbjct: 91 VLTDTKQNT-----KSFIYHFLHSWLGTGLLTSRGPKW-QNRRKILTPAFHFNILQEFIQ 144
Query: 472 VYIGEECEALVQLRFADAGEPIL 540
++ EE + LV+ A++ +P +
Sbjct: 145 IF-NEETKRLVEDLEAESHKPYI 166
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 32.7 bits (71), Expect = 0.003
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Frame = +1
Query: 121 PGPTPLPVVGNLISVLWESRKFKCHHLIWQSWSQKYGNLLGLRL---GSINVVVVTGIEL 291
P P P++GNL ++ + L + KY + L + G +N++ +EL
Sbjct: 34 PQPPAYPIIGNLFDIMRTPEQL---FLAERERGLKYYPIYKLDVCGNGGVNLLNPEDVEL 90
Query: 292 IKEVSNREVFEGRPDGFFYTMRSFGKKLGLVFSDGPTWHRTRRFVLKYLKNFGYNSRFMN 471
+ + + F Y GL+ S GP W + RR +L +F F+
Sbjct: 91 VLTDTKQNT-----KSFIYHFLHSWLGTGLLTSAGPKW-QNRRKILTPAFHFNILQEFIQ 144
Query: 472 VYIGEECEALVQLRFADAGEPIL 540
++ EE + LV+ A+ +P +
Sbjct: 145 IF-NEETKRLVEDLEAECHKPYI 166
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -2
Query: 395 PSEKTNPSFFPNDLMV*KNPSGLPSNTSRFETSLMSSIPVTTT 267
P +PS P+ L + + P+ +SR + SS+P T +
Sbjct: 71 PQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTAS 113
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 507 LHEGFTFFAYVNVHETG 457
+H G TF + NVH +G
Sbjct: 157 IHPGMTFRYHFNVHNSG 173
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 445 NSLNISAR-NVWSCATLGHRRKPIPVSFQTISWYR 344
NS+ +S+ ++ LGHRR+ + +S T ++ R
Sbjct: 204 NSVGVSSEVSLPQFKVLGHRRRAVEISLTTGNYSR 238
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 127 PTPLPVVGNLISVLWESRKFKCHHLIWQSWSQKYGNLLG 243
P+P ++ N+ + W++ + L+ S + G LLG
Sbjct: 227 PSPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLG 265
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 127 PTPLPVVGNLISVLWESRKFKCHHLIWQSWSQKYGNLLG 243
P+P ++ N+ + W++ + L+ S + G LLG
Sbjct: 227 PSPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLG 265
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 127 PTPLPVVGNLISVLWESRKFKCHHLIWQSWSQKYGNLLG 243
P+P ++ N+ + W++ + L+ S + G LLG
Sbjct: 547 PSPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLG 585
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 247 SSPIDSHTSETTIAISSGDT*T 182
SSP SH+SE++ + +S T T
Sbjct: 201 SSPTPSHSSESSFSAASSYTNT 222
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +1
Query: 382 VFSDGPTWHRTRRFVLKYLKN 444
+++ G WH T ++++LK+
Sbjct: 535 IYACGTMWHETPEEMMEFLKS 555
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +1
Query: 382 VFSDGPTWHRTRRFVLKYLKN 444
+++ G WH T ++++LK+
Sbjct: 535 IYACGTMWHETPEEMMEFLKS 555
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 33 GLVMLALIVLCFIXVFLYHKPTASWALLS 119
GL++L L+ +CF ++ + S LLS
Sbjct: 326 GLLILRLVSVCFYGSWINEESKLSLDLLS 354
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,269
Number of Sequences: 336
Number of extensions: 4654
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -