Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_O08
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    25   0.91 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   6.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   6.4  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 433 GMMYTLYKNHFNKLKGNEH 489
           G + T Y++HFN   GN H
Sbjct: 35  GPLRTSYQHHFNSPAGNAH 53


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 215 SCDIFRFHNA*QMCSLRMTSVTTKRNDLKRW 123
           S  +FRF    Q C++ +  +T+  N++ RW
Sbjct: 13  SNQLFRFG---QFCAICVPKITSTNNEVPRW 40


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 601 PSRQRRFPHT*HIFYDV 551
           P++++RFPH  H ++ V
Sbjct: 16  PTKEKRFPHRIHSYFMV 32


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 601 PSRQRRFPHT*HIFYDV 551
           P++++RFPH  H ++ V
Sbjct: 16  PTKEKRFPHRIHSYFMV 32


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 211 QEKPTFDYHEESQ 249
           QEK T++Y+E +Q
Sbjct: 28  QEKTTYEYYENNQ 40


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 211 QEKPTFDYHEESQ 249
           QEK T++Y+E +Q
Sbjct: 19  QEKTTYEYYENNQ 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,287
Number of Sequences: 336
Number of extensions: 2552
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)