Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_O08
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0124 + 12526572-12526689,12528205-12528392                       29   5.5  

>09_03_0124 + 12526572-12526689,12528205-12528392
          Length = 101

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 25/79 (31%), Positives = 35/79 (44%)
 Frame = +1

Query: 208 SQEKPTFDYHEESQTEKLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQ 387
           S   P   Y +E   E   +K  ++PF+ IG       +  G  ++ R G       LM+
Sbjct: 12  SSTPPPPMYTDEFALE--GKKPVKNPFVPIGALVTAGVLTAGLISF-RYGNSKLGQKLMR 68

Query: 388 FRVIAQGTVVGALTAGMMY 444
            RV+AQG  V AL  G  Y
Sbjct: 69  ARVVAQGATV-ALMIGSAY 86


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,646,321
Number of Sequences: 37544
Number of extensions: 244597
Number of successful extensions: 484
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)