Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_O02
(810 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 231 4e-63
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 123 2e-30
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 23 2.9
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.9
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 2.9
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 22 5.0
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 22 5.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 6.6
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 231 bits (566), Expect = 4e-63
Identities = 123/206 (59%), Positives = 135/206 (65%), Gaps = 22/206 (10%)
Frame = +1
Query: 64 SFAIRDILPEALSRSP-----------SPSDAELDVTGTETPPPCASTS-----NENKKN 195
SF+I ILPE +P S SD +LDVTGT P C+ S E K
Sbjct: 22 SFSISSILPETALEAPKSPENHPETELSDSDCDLDVTGTPPPLDCSKNSPEKESEEKKSK 81
Query: 196 EKPAYSYNALIMMAIRSSPEKRLTLNGIYEYIMKNFPYYKENKQGWQNSIRHNLSLNKCF 375
EKP YSYNALIMMAIR+SPEKRLTLNGIYEYIM+NFPYY+ENKQGWQNSIRHNLSLNKCF
Sbjct: 82 EKPPYSYNALIMMAIRNSPEKRLTLNGIYEYIMRNFPYYRENKQGWQNSIRHNLSLNKCF 141
Query: 376 VKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKXXXXXXXXXXXXXXXFKR----GALLH 543
VKVPRHYDDPGKGNYWMLDPS++DVFIGGTTGK FKR GA
Sbjct: 142 VKVPRHYDDPGKGNYWMLDPSAEDVFIGGTTGKLRRRSTAASRSRLAAFKRTIALGAFYQ 201
Query: 544 PM--FGNPYASLVGLYPPLLSVYGRY 615
P+ F PY G +L+ Y RY
Sbjct: 202 PLQPFPPPYPFYPGT-SAMLAAYQRY 226
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 123 bits (296), Expect = 2e-30
Identities = 54/97 (55%), Positives = 72/97 (74%)
Frame = +1
Query: 172 TSNENKKNEKPAYSYNALIMMAIRSSPEKRLTLNGIYEYIMKNFPYYKENKQGWQNSIRH 351
T + + KP YSY +LI MAI++SP+K LTL+ IY++IM FP+Y++N+Q WQNSIRH
Sbjct: 131 TYRRSYTHAKPPYSYISLITMAIQNSPQKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRH 190
Query: 352 NLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGG 462
+LS N CFVKVPR D PGKG++W L P S ++F G
Sbjct: 191 SLSFNDCFVKVPRTPDKPGKGSFWSLHPDSGNMFENG 227
Score = 23.0 bits (47), Expect = 2.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 52 SPPHSFAIRDILPEALSRSPSPSDAELDVTGTETPPPCAST 174
S H F+I +LP A S++ A++ G T P S+
Sbjct: 365 SSNHPFSINRLLPTAESKADIKMYADMHQYGYNTLSPLPSS 405
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 121 DAELDVTGTETPPPCAS 171
+ E+ VTG + PPP S
Sbjct: 143 EIEVKVTGNDAPPPITS 159
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 210 QLQRTHHDGHPQQPRETTHSQRYLRVHH 293
Q HH GH Q + H Q + + H
Sbjct: 160 QSMNNHHMGHHMQEQHPQHHQPHHQQQH 187
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 210 QLQRTHHDGHPQQPRETTHSQRYLRVHH 293
Q HH GH Q + H Q + + H
Sbjct: 162 QSMNNHHMGHHMQEQHPQHHQPHHQQQH 189
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 22.2 bits (45), Expect = 5.0
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 379 KVPRHYDDPGKGNYWM 426
++ H + P KG++WM
Sbjct: 100 RIYMHPESPSKGSHWM 115
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 120 GGRGRTRQGLREDVADREAVRRTHS 46
GGR +GLR+ REA + T S
Sbjct: 19 GGRTLVEKGLRKQGVPREATKITLS 43
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 21.8 bits (44), Expect = 6.6
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +3
Query: 183 KQEKRKTGLQLQRTHHDGHPQQPRETTHSQRYLRVHHEKFPVLQREQTR---LAKFYTSQ 353
K+EK T + Q DG +E +R +H + + + R F+++
Sbjct: 847 KREKSPTSDKAQEA--DGEVVVKKEVDEEERL--ENHTSVKIKREAEDRDEDERSFHSNG 902
Query: 354 FEFEQVLRESAAPLRRPRQGELLDAGS 434
+ E + S +PL PRQ AGS
Sbjct: 903 AKEEDEDKPSVSPLTSPRQPAETHAGS 929
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,031
Number of Sequences: 336
Number of extensions: 2811
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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