Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_O02
(810 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 110 2e-25
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 106 4e-24
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 105 1e-23
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 95 1e-20
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 29 0.78
SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr ... 28 1.4
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 27 2.4
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 5.5
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 26 5.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 7.3
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 9.6
SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr ... 25 9.6
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 9.6
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 110 bits (265), Expect = 2e-25
Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 7/123 (5%)
Frame = +1
Query: 109 PSPSDAELDVTGTETPPPCASTSNENKK-------NEKPAYSYNALIMMAIRSSPEKRLT 267
P PS+ LD P +S S E ++ +KP YSY LI M+I SP++RLT
Sbjct: 91 PPPSEQSLDTIIYRNPSVSSSQSQEPEEFFLPLDDGKKPPYSYAMLIGMSIIRSPDRRLT 150
Query: 268 LNGIYEYIMKNFPYYKENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDD 447
L+ IY++I F +Y ++ GWQNSIRHNLSLNK F+K+ R + PGKG++W + P ++
Sbjct: 151 LSAIYDWISNTFSFYNKSNNGWQNSIRHNLSLNKAFMKIERPRNLPGKGHFWSIRPGHEE 210
Query: 448 VFI 456
F+
Sbjct: 211 QFL 213
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 106 bits (254), Expect = 4e-24
Identities = 51/119 (42%), Positives = 70/119 (58%)
Frame = +1
Query: 103 RSPSPSDAELDVTGTETPPPCASTSNENKKNEKPAYSYNALIMMAIRSSPEKRLTLNGIY 282
+S SPSD L P + + +KP SY LI + ++P K++TL I
Sbjct: 266 KSTSPSDTVLH-------PDLNGSPDTGDATQKPNLSYANLIARTLIANPNKKMTLGDIC 318
Query: 283 EYIMKNFPYYKENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIG 459
E+I N+ YY+ W NSIRHNLSLNK F+++PR ++PGKG++WMLDPS D F G
Sbjct: 319 EWIANNWSYYRHQPPAWHNSIRHNLSLNKAFIRIPRRQNEPGKGSFWMLDPSYIDQFEG 377
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 105 bits (251), Expect = 1e-23
Identities = 48/91 (52%), Positives = 60/91 (65%)
Frame = +1
Query: 193 NEKPAYSYNALIMMAIRSSPEKRLTLNGIYEYIMKNFPYYKENKQGWQNSIRHNLSLNKC 372
N+KP YSY+ +I AI SS E +TL+ IY +I ++PYY+ K GWQNSIRHNLSLNK
Sbjct: 221 NKKPPYSYSVMIAQAILSSSECMMTLSNIYSWISTHYPYYRTTKSGWQNSIRHNLSLNKA 280
Query: 373 FVKVPRHYDDPGKGNYWMLDPSSDDVFIGGT 465
F KVPR + GKG W + P + FI T
Sbjct: 281 FRKVPRKSGEQGKGMKWSIVPEFREEFIAKT 311
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 94.7 bits (225), Expect = 1e-20
Identities = 45/87 (51%), Positives = 55/87 (63%)
Frame = +1
Query: 196 EKPAYSYNALIMMAIRSSPEKRLTLNGIYEYIMKNFPYYKENKQGWQNSIRHNLSLNKCF 375
EKP SY LI +AI S K+LTL+GIY +I F YY + GWQNSIRHNLSLNK F
Sbjct: 80 EKPPCSYATLIGLAILQSHNKQLTLSGIYTWIRNTFRYYLNHDGGWQNSIRHNLSLNKAF 139
Query: 376 VKVPRHYDDPGKGNYWMLDPSSDDVFI 456
+KV + KG+YW +DP F+
Sbjct: 140 IKVEKPKGKTLKGHYWTIDPDHMQNFV 166
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 29.1 bits (62), Expect = 0.78
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 52 SPPHSFAIRDILPEALSRSPSPS-DAELDVTGTETPPPCASTSNENKKNEKPAYSYNALI 228
SPP S P A S PSP+ + T P S S NK EKPA S N I
Sbjct: 463 SPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTTTPSATSFSIINK--EKPARSPNETI 520
>SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 192
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1
Query: 339 ILPTLFVLFVIREIFHDVLVD 277
ILPTL +L I IFH V+VD
Sbjct: 10 ILPTLLILSFIIWIFHSVMVD 30
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 145 TETPPPCASTSNENKKN 195
T+TPP ASTSN NKKN
Sbjct: 349 TDTPP--ASTSNSNKKN 363
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 5.5
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 19 GASGALCRTTMSPPHSFAIRDIL--PEALSRSPSPSDAELDVTGTETPPPCASTSNENKK 192
G+S + PP S A I P+ S P P TG + PP +S + N
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
Query: 193 NEKPA 207
PA
Sbjct: 390 APPPA 394
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 26.2 bits (55), Expect = 5.5
Identities = 26/123 (21%), Positives = 51/123 (41%)
Frame = +1
Query: 85 LPEALSRSPSPSDAELDVTGTETPPPCASTSNENKKNEKPAYSYNALIMMAIRSSPEKRL 264
L SRSP S ++ V A T+N + NE + + +++ SP ++L
Sbjct: 574 LRSRFSRSPKKSSVKIVVDNANDDTDQAPTTNSSSLNENLLGGHASENDKSLKQSPFQKL 633
Query: 265 TLNGIYEYIMKNFPYYKENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSD 444
T + + + + + NSI SL+ ++ P+ D K + + S +
Sbjct: 634 T-RRLSDLSVNSSGQISKQDFDNSNSIFSESSLSSPIIEEPKTLIDCLKNFTHVEELSGE 692
Query: 445 DVF 453
++F
Sbjct: 693 NMF 695
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 82 ILPEALSRSP-SPSDAELDVTGTETPPPCASTSN 180
I P S +P +P+ + T TPPP ASTS+
Sbjct: 291 IPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSS 324
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 82 ILPEALSRSP-SPSDAELDVTGTETPPPCASTSN 180
I P S +P +P+ + T TPPP ASTS+
Sbjct: 345 IPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSS 378
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 9.6
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 100 SRSPSPSDAELDVTGTETPPPCASTSNENKKNEKPAYSYNAL 225
S+ SPS +D T P +SNE E+P S AL
Sbjct: 378 SKQDSPSTVPVDKQETAKPINKQVSSNETSAQEEPRESVAAL 419
>SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 495
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 539 SSAPRLNAASRDRDAAVDLLRSLPVVP 459
S P N+A+ + AA+D +PV+P
Sbjct: 428 SQTPSENSAATLKQAAIDAYSQIPVIP 454
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 25.4 bits (53), Expect = 9.6
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +1
Query: 43 TTMSPPHSFAIRDILPEALSRSPSPSDAELDVTGTETPPPCASTSNENKKNEKPAYSYNA 222
T M P ++ LP A S + T ++ P P A + +NEKP +N
Sbjct: 200 TPMHPLPQQGVQSTLPVAPSNEDQRTMESTSPTDSQ-PQPSAPNLVSSTENEKPRVDFNY 258
Query: 223 LI 228
I
Sbjct: 259 AI 260
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,521,211
Number of Sequences: 5004
Number of extensions: 45060
Number of successful extensions: 173
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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