Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_N23
         (325 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      20   5.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   5.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   9.9  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    19   9.9  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    19   9.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 48  YIRCKSXHNCHRP 10
           ++R K+ H+CH P
Sbjct: 308 HLRKKNIHSCHIP 320


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 228 PSCLPKPI 205
           P C+PKPI
Sbjct: 53  PGCVPKPI 60


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 219 LPKPIHLHHQ 190
           LP P H HHQ
Sbjct: 735 LPPPPHPHHQ 744


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 219 LPKPIHLHHQ 190
           LP P H HHQ
Sbjct: 627 LPPPPHPHHQ 636


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 177  GTEDADDEDVSVWEDNW 227
            GT+ +DD  V  +  NW
Sbjct: 2314 GTDTSDDYKVVCYFTNW 2330


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +3

Query: 162 PAENWGTEDADDED 203
           P E W     DDED
Sbjct: 17  PTERWQRLSFDDED 30


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +3

Query: 162 PAENWGTEDADDED 203
           P E W     DDED
Sbjct: 17  PTERWQRLSFDDED 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,986
Number of Sequences: 336
Number of extensions: 1218
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)