BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_N23
(325 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070697-1|AAL48168.1| 79|Drosophila melanogaster RH34416p pro... 59 1e-09
AE014134-1237|AAF52481.1| 79|Drosophila melanogaster CG13779-P... 59 1e-09
L07065-1|AAA16186.1| 1283|Drosophila melanogaster P-glycoprotein... 29 1.4
AE014296-1803|AAN11922.1| 283|Drosophila melanogaster CG6611-PC... 28 3.2
BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p pro... 27 4.2
BT003781-1|AAO41462.1| 280|Drosophila melanogaster RE01075p pro... 27 4.2
AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA... 27 4.2
U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome ass... 27 7.3
BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p pro... 27 7.3
AY061556-1|AAL29104.1| 581|Drosophila melanogaster LP09339p pro... 27 7.3
AY061201-1|AAL28749.1| 389|Drosophila melanogaster LD15563p pro... 27 7.3
AE014296-1802|AAF50167.2| 581|Drosophila melanogaster CG6611-PB... 27 7.3
AE014296-1801|AAF50168.2| 581|Drosophila melanogaster CG6611-PA... 27 7.3
AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA... 27 7.3
AE013599-1748|AAF58353.1| 389|Drosophila melanogaster CG13333-P... 27 7.3
AY119612-1|AAM50266.1| 315|Drosophila melanogaster LD38004p pro... 26 9.7
AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p pro... 26 9.7
AY051922-1|AAK93346.1| 535|Drosophila melanogaster LD40717p pro... 26 9.7
AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA... 26 9.7
AE014296-533|AAF47703.1| 535|Drosophila melanogaster CG2162-PA ... 26 9.7
>AY070697-1|AAL48168.1| 79|Drosophila melanogaster RH34416p
protein.
Length = 79
Score = 58.8 bits (136), Expect = 1e-09
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +3
Query: 120 DLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 290
DLG PAE++ D D+E+++VWEDNW+DD ++DDF+QQL+ LE K
Sbjct: 21 DLGLLEEDDEFEEFPAEDFRVGD-DEEELNVWEDNWDDDNVEDDFSQQLKAHLESKK 76
>AE014134-1237|AAF52481.1| 79|Drosophila melanogaster CG13779-PA
protein.
Length = 79
Score = 58.8 bits (136), Expect = 1e-09
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +3
Query: 120 DLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 290
DLG PAE++ D D+E+++VWEDNW+DD ++DDF+QQL+ LE K
Sbjct: 21 DLGLLEEDDEFEEFPAEDFRVGD-DEEELNVWEDNWDDDNVEDDFSQQLKAHLESKK 76
>L07065-1|AAA16186.1| 1283|Drosophila melanogaster
P-glycoprotein/multidrug resistanceprotein protein.
Length = 1283
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/42 (26%), Positives = 29/42 (69%)
Frame = +3
Query: 168 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 293
+N+ +D D+E++ V ++ ++DV+ D + +++++K+KD
Sbjct: 655 KNFDIKDEDEEEIKVLSEDEDEDVMVTD-EKNKKKKMKKVKD 695
>AE014296-1803|AAN11922.1| 283|Drosophila melanogaster CG6611-PC,
isoform C protein.
Length = 283
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 165 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQ-QLEKLK 290
+ N G DDE+ +D+ +DD+I DD + R+ Q+ K K
Sbjct: 212 SNNEGIAGDDDEEADDDDDDDDDDIIGDDIIEARREAQITKQK 254
>BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 4.2
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +3
Query: 168 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 293
+N+ +D D+E++ V ++ ++DV+ D + +++ +K+KD
Sbjct: 685 KNFDIKDEDEEEIKVLSEDEDEDVMVTD-EKNKKKKKKKVKD 725
>BT003781-1|AAO41462.1| 280|Drosophila melanogaster RE01075p
protein.
Length = 280
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 165 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 281
+ N G DDE+ +D+ +DD+I DD + R+ E
Sbjct: 212 SNNEGIAGDDDEEADDDDDDDDDDIIGDDIIEARREARE 250
>AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 4.2
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +3
Query: 168 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 293
+N+ +D D+E++ V ++ ++DV+ D + +++ +K+KD
Sbjct: 685 KNFDIKDEDEEEIKVLSEDEDEDVMVTD-EKNKKKKKKKVKD 725
>U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome
assembly protein NAP-1 protein.
Length = 370
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDVIQDD 251
+D DDED +++N ED+ DD
Sbjct: 325 DDEDDEDEEEYDENEEDEYDDDD 347
>BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p
protein.
Length = 370
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDVIQDD 251
+D DDED +++N ED+ DD
Sbjct: 325 DDEDDEDEEEYDENEEDEYDDDD 347
>AY061556-1|AAL29104.1| 581|Drosophila melanogaster LP09339p
protein.
Length = 581
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 165 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQ 272
+ N G DDE+ +D+ +DD+I DD + R+
Sbjct: 212 SNNEGIAGDDDEEADDDDDDDDDDIIGDDIIEARRE 247
>AY061201-1|AAL28749.1| 389|Drosophila melanogaster LD15563p
protein.
Length = 389
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 302
E+A++E+V+ ++ EDD DD N +++ +KS
Sbjct: 145 EEAEEENVAEEQEKAEDDDDDDDDNTMGNASYDEMPQEKS 184
>AE014296-1802|AAF50167.2| 581|Drosophila melanogaster CG6611-PB,
isoform B protein.
Length = 581
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 165 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQ 272
+ N G DDE+ +D+ +DD+I DD + R+
Sbjct: 212 SNNEGIAGDDDEEADDDDDDDDDDIIGDDIIEARRE 247
>AE014296-1801|AAF50168.2| 581|Drosophila melanogaster CG6611-PA,
isoform A protein.
Length = 581
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 165 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQ 272
+ N G DDE+ +D+ +DD+I DD + R+
Sbjct: 212 SNNEGIAGDDDEEADDDDDDDDDDIIGDDIIEARRE 247
>AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA
protein.
Length = 370
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDVIQDD 251
+D DDED +++N ED+ DD
Sbjct: 325 DDEDDEDEEEYDENEEDEYDDDD 347
>AE013599-1748|AAF58353.1| 389|Drosophila melanogaster CG13333-PA
protein.
Length = 389
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 302
E+A++E+V+ ++ EDD DD N +++ +KS
Sbjct: 145 EEAEEENVAEEQEKAEDDDDDDDDNTMGNASYDEMPQEKS 184
>AY119612-1|AAM50266.1| 315|Drosophila melanogaster LD38004p
protein.
Length = 315
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 180 TEDADDEDVSVWEDNWED--DVIQDDFNQQLRQQLEKLK 290
TED D+ED WE +++ D + Q+L + + K K
Sbjct: 109 TEDDDEEDEDDWEKMFDESGDCLDPKLLQELTESVGKCK 147
>AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p
protein.
Length = 1712
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 195 DEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQ 296
DE+VS+ D W DV+ D L + + D+
Sbjct: 743 DENVSIISDTWSTDVLASDSENTLDATVSERGDR 776
>AY051922-1|AAK93346.1| 535|Drosophila melanogaster LD40717p
protein.
Length = 535
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 180 TEDADDEDVSVWEDNWED--DVIQDDFNQQLRQQLEKLK 290
TED D+ED WE +++ D + Q+L + + K K
Sbjct: 329 TEDDDEEDEDDWEKMFDESGDCLDPKLLQELTESVGKCK 367
>AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA
protein.
Length = 1712
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 195 DEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQ 296
DE+VS+ D W DV+ D L + + D+
Sbjct: 743 DENVSIISDTWSTDVLASDSENTLDATVSERGDR 776
>AE014296-533|AAF47703.1| 535|Drosophila melanogaster CG2162-PA
protein.
Length = 535
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 180 TEDADDEDVSVWEDNWED--DVIQDDFNQQLRQQLEKLK 290
TED D+ED WE +++ D + Q+L + + K K
Sbjct: 329 TEDDDEEDEDDWEKMFDESGDCLDPKLLQELTESVGKCK 367
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,568,329
Number of Sequences: 53049
Number of extensions: 211960
Number of successful extensions: 742
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -