Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_N23
(325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006714-3|AAK29724.3| 82|Caenorhabditis elegans Hypothetical ... 50 5e-07
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 27 2.3
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 27 2.3
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 27 2.3
AF039053-11|AAC25879.1| 301|Caenorhabditis elegans Serpentine r... 27 2.3
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 27 3.1
Z81135-3|CAB03456.1| 251|Caenorhabditis elegans Hypothetical pr... 27 4.1
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 27 4.1
U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical p... 27 4.1
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 26 5.4
AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical ... 26 5.4
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 26 5.4
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 26 5.4
Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z81554-5|CAB04510.2| 401|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical p... 26 7.2
U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical pr... 26 7.2
U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical pr... 26 7.2
EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein. 26 7.2
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z74032-7|CAD54140.1| 330|Caenorhabditis elegans Hypothetical pr... 25 9.5
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 25 9.5
U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid precur... 25 9.5
U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid precurs... 25 9.5
U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid pr... 25 9.5
AF016668-7|AAB66091.3| 471|Caenorhabditis elegans Hypothetical ... 25 9.5
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet... 25 9.5
>AC006714-3|AAK29724.3| 82|Caenorhabditis elegans Hypothetical
protein Y119D3B.15 protein.
Length = 82
Score = 49.6 bits (113), Expect = 5e-07
Identities = 16/42 (38%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +3
Query: 162 PAENWGTE-DADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEK 284
P + W + +++DV+VWEDNW+D+ + +F++QL+++L K
Sbjct: 35 PVQEWAERAEGEEDDVNVWEDNWDDETHESEFSKQLKEELRK 76
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDVIQDDF 254
+D DDED +ED+ E+DVI D++
Sbjct: 718 DDDDDEDCDDFEDD-EEDVIDDEY 740
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 299
ED DDED ED E+D ++D ++ + E+ +D +
Sbjct: 576 EDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDE 614
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 299
ED DDED ED E+D ++D ++ + E+ +D +
Sbjct: 586 EDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDE 624
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 281
+D ++ED ED ED+ D+ N++++++ E
Sbjct: 59 DDEEEEDEDEEEDEAEDEAEDDEENEEVKEEKE 91
>AF039053-11|AAC25879.1| 301|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 19 protein.
Length = 301
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 122 VYFLFVSHYTVMIIEIRKYHLL 57
VY LFV Y+++ E+RKYH L
Sbjct: 63 VYLLFVIAYSLIPEELRKYHNL 84
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 162 PAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQ-QLEKLKDQK 299
P E E D+E+ ED ED+ +++D ++ QLE K++K
Sbjct: 165 PEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEK 211
>Z81135-3|CAB03456.1| 251|Caenorhabditis elegans Hypothetical
protein W01G7.4 protein.
Length = 251
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 189 ADDEDVSVWEDNWEDD 236
ADDED S EDNW +D
Sbjct: 171 ADDEDDSNDEDNWRND 186
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 219 DNWEDDVIQDDFNQQLRQQLEKLKDQK 299
D +DDV DD + + R+Q +LK QK
Sbjct: 664 DEEDDDVASDDPDAEKRRQKRRLKRQK 690
>U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical
protein T02G5.12 protein.
Length = 556
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +3
Query: 192 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKL 287
DD+D + D +ED+V + D+N++ +++ L
Sbjct: 190 DDDDDGEYNDVFEDEVKKIDYNKRFEEKVSLL 221
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 186 DADDEDVSVWEDNWEDDVIQDDFNQQL 266
D DED+ +EDNW +I + FN +L
Sbjct: 1079 DEIDEDIKQFEDNW---LIYEMFNNEL 1102
>AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical
protein T10B5.3 protein.
Length = 295
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 165 AENWGTEDADDEDVSVWEDNWEDDVIQDD 251
+E++ T +DD+ S +D WED+ +++D
Sbjct: 226 SEDFDTIGSDDDGESSEDDWWEDNELKED 254
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 26.2 bits (55), Expect = 5.4
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 108 KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDV-SVWEDNWEDDVIQDDFNQQLRQQLEK 284
K+KV++ E+ E DDED +E+ E++V DDF + QLE+
Sbjct: 661 KKKVEIPVISSESEEEEYEEEDEYEEYEDDEDEDEYYEEEEENEVEDDDFLTE--TQLEE 718
Query: 285 LKDQ 296
L +Q
Sbjct: 719 LMEQ 722
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 168 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQ 296
E W E +DD VS W ++ DD++ N ++ LK++
Sbjct: 2425 EQW--EYSDDSSVSTWFNDGTDDILNRLINSDYLEEHMILKER 2465
>Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 168 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 299
E+ G +D DD++ E+ E D +DD + +++K++ K
Sbjct: 97 EDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIKKIRKPK 140
>Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 168 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 299
E+ G +D DD++ E+ E D +DD + +++K++ K
Sbjct: 97 EDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIKKIRKPK 140
>Z81554-5|CAB04510.2| 401|Caenorhabditis elegans Hypothetical
protein F57G4.8 protein.
Length = 401
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 186 DADDEDVSVWEDNWED 233
D DDEDV W +N +D
Sbjct: 140 DNDDEDVQYWRENVDD 155
>Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical
protein ZC443.4 protein.
Length = 389
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 183 EDADDEDVSVWEDNWEDDV-IQDDFNQQLRQQ 275
ED DD+D E+N EDD ++DD + + Q
Sbjct: 277 EDDDDDDDEEEEENVEDDENLEDDEDDRTEDQ 308
>Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 168 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 299
E+ G +D DD++ E+ E D +DD + +++K++ K
Sbjct: 97 EDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIKKIRKPK 140
>U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical
protein F14D12.1a protein.
Length = 680
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = -2
Query: 303 KISDPSVFPVVASTAD*NHLG*--RRLPSCLPKPIHLHHQRLLYPNFPQEILRTRHPXLA 130
+I+ S PV+++T + +LG ++ + LP+ +++ H P P+E RT H +
Sbjct: 206 QITSTSESPVLSTTDNSPYLGSEAKQRSTSLPEYVNVSHVIRPTPPLPEEPSRTNHHEVI 265
Query: 129 NQGLLSVCQP 100
++ ++ P
Sbjct: 266 HRKASTMTTP 275
>U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical
protein F14D12.1b protein.
Length = 713
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = -2
Query: 303 KISDPSVFPVVASTAD*NHLG*--RRLPSCLPKPIHLHHQRLLYPNFPQEILRTRHPXLA 130
+I+ S PV+++T + +LG ++ + LP+ +++ H P P+E RT H +
Sbjct: 206 QITSTSESPVLSTTDNSPYLGSEAKQRSTSLPEYVNVSHVIRPTPPLPEEPSRTNHHEVI 265
Query: 129 NQGLLSVCQP 100
++ ++ P
Sbjct: 266 HRKASTMTTP 275
>EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein.
Length = 715
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 168 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 299
E+ G +D DD++ E+ E D +DD + +++K++ K
Sbjct: 97 EDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIKKIRKPK 140
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 174 WGTEDADDEDVSVWEDNWEDDVIQDDFN 257
W T DD+D W D + + +DF+
Sbjct: 732 WSTLQRDDDDEEEWNDEEDLSDVGEDFD 759
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 162 PAENWGTEDADDEDVSVWEDNWEDDV-IQDDFNQQLRQQLEKLKDQK 299
P+ + +ED D+ ++ +D W +V DDF QL ++ ++QK
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQK 444
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 162 PAENWGTEDADDEDVSVWEDNWEDDV-IQDDFNQQLRQQLEKLKDQK 299
P+ + +ED D+ ++ +D W +V DDF QL ++ ++QK
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQK 444
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 162 PAENWGTEDADDEDVSVWEDNWEDDV-IQDDFNQQLRQQLEKLKDQK 299
P+ + +ED D+ ++ +D W +V DDF QL ++ ++QK
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQK 444
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 174 WGTEDADDEDVSVWEDNWEDDVIQDDFN 257
W T DD+D W D + + +DF+
Sbjct: 732 WSTLQRDDDDEEEWNDEEDLSDVGEDFD 759
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 162 PAENWGTEDADDEDVSVWEDNWEDDV-IQDDFNQQLRQQLEKLKDQK 299
P+ + +ED D+ ++ +D W +V DDF QL ++ ++QK
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQK 444
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 162 PAENWGTEDADDEDVSVWEDNWEDDV-IQDDFNQQLRQQLEKLKDQK 299
P+ + +ED D+ ++ +D W +V DDF QL ++ ++QK
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQK 444
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 162 PAENWGTEDADDEDVSVWEDNWEDDV-IQDDFNQQLRQQLEKLKDQK 299
P+ + +ED D+ ++ +D W +V DDF QL ++ ++QK
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQK 444
>Z74032-7|CAD54140.1| 330|Caenorhabditis elegans Hypothetical
protein F35B12.9 protein.
Length = 330
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +3
Query: 180 TEDADDEDVSVWEDNWEDDVIQD-DFNQQLR 269
++ +D+ +S D++ED+V+Q+ + NQQ R
Sbjct: 34 SDSSDESSISSEADSFEDNVVQNKNTNQQRR 64
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 174 WGTEDADDEDVSVWEDNWEDDVIQDDFN 257
W T DD+D W D + + +DF+
Sbjct: 732 WSTLQRDDDDEEEWNDEEDLSDVGEDFD 759
>U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform a protein.
Length = 686
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 180 TEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS*F 308
T+D DD++ S + E D +D ++LR +E + D+ + F
Sbjct: 558 TDDEDDDEDSSSSTSSESDEDEDKNIKELRVDIEPIIDEPASF 600
>U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform b protein.
Length = 684
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 180 TEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS*F 308
T+D DD++ S + E D +D ++LR +E + D+ + F
Sbjct: 556 TDDEDDDEDSSSSTSSESDEDEDKNIKELRVDIEPIIDEPASF 598
>U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid
protein precursor protein.
Length = 680
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 180 TEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS*F 308
T+D DD++ S + E D +D ++LR +E + D+ + F
Sbjct: 552 TDDEDDDEDSSSSTSSESDEDEDKNIKELRVDIEPIIDEPASF 594
>AF016668-7|AAB66091.3| 471|Caenorhabditis elegans Hypothetical
protein F36H9.1 protein.
Length = 471
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -2
Query: 177 PNFPQEILRTRHPXLANQGLLSVCQPLYCDDY*NKEISL 61
PN+ Q++ R + N L +C +C+ N E+ L
Sbjct: 357 PNYTQDLSRKNMCKIENDWLQCICDTEFCNREQNIEVPL 395
>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
protein 3 protein.
Length = 1599
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 192 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 299
DD+D+S W D E D D+ + +L+KLK ++
Sbjct: 388 DDDDMSFWGDEGELD--SDEEKVEGASELKKLKAEE 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,085,587
Number of Sequences: 27780
Number of extensions: 112792
Number of successful extensions: 459
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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