Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_N22
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 384 e-107
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 383 e-107
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 383 e-107
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 208 5e-55
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 206 4e-54
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 117 2e-27
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 58 1e-09
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 49 6e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 48 1e-06
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 45 1e-05
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 45 1e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 42 1e-04
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 42 1e-04
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 35 1e-04
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 33 0.034
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 33 0.045
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.42
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.56
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 29 0.98
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 3.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 6.9
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 9.1
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 25 9.1
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 384 bits (944), Expect = e-107
Identities = 176/214 (82%), Positives = 195/214 (91%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 305
MGK K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 306 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 485
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGT 120
Query: 486 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 665
GEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKK 178
Query: 666 IGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGW 767
+G+NP V FVP+SG+ GDNM+EP+T MPW++GW
Sbjct: 179 VGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 383 bits (943), Expect = e-107
Identities = 175/214 (81%), Positives = 195/214 (91%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 305
MGK K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 306 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 485
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 486 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 665
GEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKK 178
Query: 666 IGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGW 767
+G+NP V FVP+SG+ GDNM+EP+T MPW++GW
Sbjct: 179 VGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 383 bits (943), Expect = e-107
Identities = 175/214 (81%), Positives = 195/214 (91%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 305
MGK K HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 306 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 485
DKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GT
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 486 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 665
GEFEAGISK+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKK 178
Query: 666 IGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGW 767
+G+NP V FVP+SG+ GDNM+EP+T MPW++GW
Sbjct: 179 VGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 208 bits (509), Expect = 5e-55
Identities = 96/213 (45%), Positives = 145/213 (68%), Gaps = 4/213 (1%)
Frame = +3
Query: 138 KPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 317
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 318 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 497
ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFE
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 355
Query: 498 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI-GY 674
AG + GQTREHA+LA T G+ L+V +NKMD +SE R++E ++S +++++ GY
Sbjct: 356 AGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGY 415
Query: 675 NPXA-VAFVPISGWHGDNMLE--PSTKMPWFKG 764
N V ++P+S + G N+ + S+ PW++G
Sbjct: 416 NSKTDVKYMPVSAYTGQNVKDRVDSSVCPWYQG 448
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 206 bits (502), Expect = 4e-54
Identities = 103/212 (48%), Positives = 137/212 (64%), Gaps = 3/212 (1%)
Frame = +3
Query: 138 KPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 317
KP +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 318 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 497
ER RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE
Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFE 294
Query: 498 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY-IKKIGY 674
G +NGQTREHA L LG+ +++V VNK+D +SE RF+EIK VS + IK +G+
Sbjct: 295 RGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGF 352
Query: 675 NPXAVAFVPISGWHGDNML--EPSTKMPWFKG 764
V FVPIS G N++ + S W+KG
Sbjct: 353 KTSNVHFVPISAISGTNLIQKDSSDLYKWYKG 384
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 117 bits (281), Expect = 2e-27
Identities = 70/175 (40%), Positives = 99/175 (56%)
Frame = +3
Query: 132 KXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 311
+ KPH+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 312 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 491
E+ RGITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+
Sbjct: 94 APEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQ 153
Query: 492 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 656
QTREH LLA +GVKQ++V +NK+D EP E E+++ +S Y
Sbjct: 154 MP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY 201
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 58.0 bits (134), Expect = 1e-09
Identities = 48/148 (32%), Positives = 70/148 (47%)
Frame = +3
Query: 150 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 329
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 330 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 509
RGITI+ A F + +ID PGH DF + + D AV I+ + AG+
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV- 130
Query: 510 KNGQTREHALLAFTLGVKQLIVGVNKMD 593
QT+ A G+ ++I VNKMD
Sbjct: 131 -EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 49.2 bits (112), Expect = 6e-07
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Frame = +3
Query: 96 SISPSLHSPKMGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG 275
+I L+ + K NI + H+DSGK+T T ++Y G I K+ E+
Sbjct: 43 NIQEQLNDNDKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV- 92
Query: 276 KGSFKYAWVLDKLKAERERGITIDIA----LWK---------------FETSKYYVTIID 398
+G +D ++ ERE+GITI A W+ FE S Y + IID
Sbjct: 93 RGKDNVGAKMDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIID 151
Query: 399 APGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 533
PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 152 TPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 48.0 bits (109), Expect = 1e-06
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Frame = +3
Query: 105 PSLHSPKMGKXKPHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 281
PS+ G + + N VI H+D GKST + ++ G I++ +
Sbjct: 44 PSIQEVVRGIPQNRVRNWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RN 92
Query: 282 SFKYAWVLDKLKAERERGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 449
F LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ +
Sbjct: 93 QF-----LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAA 147
Query: 450 ADCAVLIVAAGTG 488
+ +L+V A G
Sbjct: 148 CEGCILLVDASQG 160
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 44.8 bits (101), Expect = 1e-05
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 296
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 297 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 473
+ L AE D+ + + + V +ID+PGH DF + D A+++V
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 44.8 bits (101), Expect = 1e-05
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 296
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 297 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 473
+ L AE D+ + + + V +ID+PGH DF + D A+++V
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +3
Query: 381 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 560
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 561 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 659
K +I+ NK+D +E ++ I K + +
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 41.5 bits (93), Expect = 1e-04
Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 7/215 (3%)
Frame = +3
Query: 138 KPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK-----FEKEAQEMGKGSFKYAWV 302
KP ++++G SGK T L ++ G D +T++K +KE+ S K W
Sbjct: 278 KPRTKLLLLGPPKSGKKTLLSRLFFQIGSFDPKTMQKCTVLNAKKESLSSVLKSTKTKWY 337
Query: 303 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 482
+ + ID L F T +A +F+K+ I
Sbjct: 338 DFETFSNSYSSTIIDFPLGIFTT--------NASSRDNFLKHSSLFQVMNTAIFTIDCLN 389
Query: 483 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 662
E GIS Q L L + + + KMD E + E +F + + S++K
Sbjct: 390 PLEGLDGISSILQ------LMNGLSISSYMFAITKMDEIE--WDENKFINLVNSIQSFLK 441
Query: 663 KIGYNPXAVAFVPISGWHGDNMLEPSTK--MPWFK 761
+ F+PISG G N+ S + W+K
Sbjct: 442 ESCGIIEKSKFIPISGLKGTNLTSISQEKLSQWYK 476
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 35.1 bits (77), Expect(2) = 1e-04
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 273 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 446
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 447 QADCAVLIVAAGTG 488
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
Score = 25.4 bits (53), Expect(2) = 1e-04
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 108 SLHSPK-MGKXKPHINIVVIGHVDSGKST 191
SL+S K G +P + + ++GHVD GK+T
Sbjct: 159 SLNSKKDSGPLRPPV-VTLMGHVDHGKTT 186
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 33.5 bits (73), Expect = 0.034
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = +3
Query: 150 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKA 320
N ++ HVD GK+T L+ G I + T+ + E+ +G + K A
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSA 74
Query: 321 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 488
I K Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 75 ISLFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 33.1 bits (72), Expect = 0.045
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +3
Query: 159 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 332
++GHVD+GK+ +L + +++ E Q++G F + K K ++
Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541
Query: 333 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 473
G K + + + IID PGH F GTS + A+L++
Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.42
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 306 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 428
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.5 bits (63), Expect = 0.56
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 343 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 215
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 28.7 bits (61), Expect = 0.98
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Frame = +3
Query: 150 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 329
+ +V GH+ GKS L+Y + + + S +Y D ERE
Sbjct: 142 SFIVAGHLHHGKSALLDLLVYYT-----------HPDTKPPKRRSLRYT---DTHYLERE 187
Query: 330 RGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 473
R ++I +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 188 RVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 367 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 236
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 333 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 235
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 312 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 184
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 588 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWF 758
+D +P + F IKK+V Y+ ++ + P + G N LEP TK PW+
Sbjct: 107 LDLKKPLLPQILFGNIKKDV--YLDQV-HRPRHYRGSGSAPLFG-NFLEPLTKTPWY 159
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,133,647
Number of Sequences: 5004
Number of extensions: 63178
Number of successful extensions: 230
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -