Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_N22
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 410 e-115
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 410 e-115
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 243 1e-92
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 303 1e-82
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 213 2e-55
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 135 3e-32
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 100 1e-21
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 100 1e-21
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 100 1e-21
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 93 2e-19
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 93 2e-19
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 7e-07
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 46 4e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 38 0.011
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.011
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 37 0.018
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 37 0.018
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.17
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.40
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.8
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.8
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.9
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 28 6.4
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 28 6.4
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 410 bits (1010), Expect = e-115
Identities = 192/216 (88%), Positives = 200/216 (92%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 305
MGK K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 306 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 485
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 486 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 665
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 666 IGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWXV 773
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW V
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAV 216
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 410 bits (1010), Expect = e-115
Identities = 192/216 (88%), Positives = 200/216 (92%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 305
MGK K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 306 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 485
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 486 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 665
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 666 IGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKGWXV 773
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW V
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAV 216
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 243 bits (594), Expect(2) = 1e-92
Identities = 112/117 (95%), Positives = 115/117 (98%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 305
MGK K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 306 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 476
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 115 bits (277), Expect(2) = 1e-92
Identities = 51/69 (73%), Positives = 57/69 (82%)
Frame = +3
Query: 567 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTK 746
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 747 MPWFKGWXV 773
MPWFKGW V
Sbjct: 174 MPWFKGWAV 182
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 303 bits (743), Expect = 1e-82
Identities = 147/172 (85%), Positives = 154/172 (89%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 305
MGK K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 306 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 485
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 486 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 641
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 709 DGTETTCWSLQPKCLGSRDG 768
D TETTC C GSRDG
Sbjct: 178 DSTETTCLRSPRTCHGSRDG 197
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 233 bits (569), Expect = 1e-61
Identities = 114/236 (48%), Positives = 164/236 (69%), Gaps = 1/236 (0%)
Frame = +3
Query: 60 QKNLVLCXAKVQSISPSLHSPKMGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT 239
++N + AK S++ P++ K IN++V+GHVD+GKST GHL++ +D RT
Sbjct: 143 RRNQLQNIAKAPSVARKTPKPRVAD-KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRT 201
Query: 240 IEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 419
I+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DF
Sbjct: 202 IDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDF 261
Query: 420 IKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDST 599
I NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+
Sbjct: 262 ISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTV 321
Query: 600 EPPYSEPRFEEIKKEVSSYI-KKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKG 764
+ +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 322 D--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 233 bits (569), Expect = 1e-61
Identities = 114/236 (48%), Positives = 164/236 (69%), Gaps = 1/236 (0%)
Frame = +3
Query: 60 QKNLVLCXAKVQSISPSLHSPKMGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT 239
++N + AK S++ P++ K IN++V+GHVD+GKST GHL++ +D RT
Sbjct: 161 RRNQLQNIAKAPSVARKTPKPRVAD-KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRT 219
Query: 240 IEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 419
I+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DF
Sbjct: 220 IDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDF 279
Query: 420 IKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDST 599
I NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+
Sbjct: 280 ISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTV 339
Query: 600 EPPYSEPRFEEIKKEVSSYI-KKIGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKG 764
+ +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 340 D--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 213 bits (519), Expect = 2e-55
Identities = 98/215 (45%), Positives = 146/215 (67%), Gaps = 3/215 (1%)
Frame = +3
Query: 129 GKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 308
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 309 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 488
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 489 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 668
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 669 GYNPXA-VAFVPISGWHGDNMLEPST--KMPWFKG 764
G+NP + +VP SG G + + T + W+ G
Sbjct: 284 GFNPKTDITYVPCSGLTGAFIKDRPTGSEGNWYSG 318
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 135 bits (327), Expect = 3e-32
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = +3
Query: 126 MGKXKPHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 305
MGK K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 306 DKLKAER 326
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 100 bits (239), Expect = 1e-21
Identities = 74/214 (34%), Positives = 108/214 (50%), Gaps = 10/214 (4%)
Frame = +3
Query: 63 KNLVLCXAKVQSIS--PSLHSPKMG------KXKPHINIVVIGHVDSGKSTTTGHLIYKC 218
K + LC K+Q +S + H G + KPH+N+ IGHVD GK+T T +
Sbjct: 14 KTVTLCEQKMQQVSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKIL 73
Query: 219 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIID 398
K+E +D E+ RGITI+ ++ET+K + ID
Sbjct: 74 ATSKGAKYRKYED---------------IDNAPEEKARGITINAFHLEYETAKRHYAHID 118
Query: 399 APGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLI 572
PGH D+IKNMITG +Q + A+L+VAA G QTREH LLA +GV ++
Sbjct: 119 CPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIV 171
Query: 573 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 674
V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 172 VFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 100 bits (239), Expect = 1e-21
Identities = 74/214 (34%), Positives = 108/214 (50%), Gaps = 10/214 (4%)
Frame = +3
Query: 63 KNLVLCXAKVQSIS--PSLHSPKMG------KXKPHINIVVIGHVDSGKSTTTGHLIYKC 218
K + LC K+Q +S + H G + KPH+N+ IGHVD GK+T T +
Sbjct: 15 KTVTLCEQKMQQVSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKIL 74
Query: 219 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIID 398
K+E +D E+ RGITI+ ++ET+K + ID
Sbjct: 75 ATSKGAKYRKYED---------------IDNAPEEKARGITINAFHLEYETAKRHYAHID 119
Query: 399 APGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLI 572
PGH D+IKNMITG +Q + A+L+VAA G QTREH LLA +GV ++
Sbjct: 120 CPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIV 172
Query: 573 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 674
V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 173 VFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 100 bits (239), Expect = 1e-21
Identities = 74/214 (34%), Positives = 108/214 (50%), Gaps = 10/214 (4%)
Frame = +3
Query: 63 KNLVLCXAKVQSIS--PSLHSPKMG------KXKPHINIVVIGHVDSGKSTTTGHLIYKC 218
K + LC K+Q +S + H G + KPH+N+ IGHVD GK+T T +
Sbjct: 15 KTVTLCEQKMQQVSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKIL 74
Query: 219 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIID 398
K+E +D E+ RGITI+ ++ET+K + ID
Sbjct: 75 ATSKGAKYRKYED---------------IDNAPEEKARGITINAFHLEYETAKRHYAHID 119
Query: 399 APGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLI 572
PGH D+IKNMITG +Q + A+L+VAA G QTREH LLA +GV ++
Sbjct: 120 CPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIV 172
Query: 573 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 674
V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 173 VFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 93.5 bits (222), Expect = 2e-19
Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Frame = +3
Query: 138 KPHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 311
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 312 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 491
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 492 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 671
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 672 YNPXAVAFV 698
+N A +
Sbjct: 195 FNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 93.5 bits (222), Expect = 2e-19
Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Frame = +3
Query: 138 KPHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 311
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 312 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 491
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 492 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 671
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 672 YNPXAVAFV 698
+N A +
Sbjct: 195 FNGDATPVI 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 59.7 bits (138), Expect = 2e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +3
Query: 150 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 329
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 330 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 509
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 510 KNGQTREHALLAFTLGVKQLIVGVNKMD 593
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.0 bits (129), Expect = 3e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +3
Query: 150 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 329
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 330 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 509
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 510 KNGQTREHALLAFTLGVKQLIVGVNKMD 593
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +3
Query: 150 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 329
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 330 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 488
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 7e-07
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 273 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 449
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 450 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 593
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 27.1 bits (57), Expect(2) = 7e-07
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 99 ISPSLH-SPKMGKXKPHINIVVIGHVDSGKST 191
+ P L SPK + +P I + ++GHVD GK+T
Sbjct: 141 LHPQLEASPKDLERRPPI-VTIMGHVDHGKTT 171
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 45.6 bits (103), Expect = 4e-05
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 3/199 (1%)
Frame = +3
Query: 147 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 326
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 327 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 503
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 504 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--N 677
I QT EH LLA ++I+ +NK D E + + E K+V +K +G N
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDEN 162
Query: 678 PXAVAFVPISGWHGDNMLE 734
V G+ + ML+
Sbjct: 163 SPIVEMSLADGYFKEEMLQ 181
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 44.0 bits (99), Expect = 1e-04
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +3
Query: 150 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 302
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 303 LDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 470
L+K E +G T+++ K + + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 471 VAAGTG 488
V +G
Sbjct: 141 VDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +3
Query: 150 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 302
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 303 LDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 470
L+K E +G T+++ K + + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVV 140
Query: 471 VAAGTG 488
V +G
Sbjct: 141 VDCVSG 146
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 41.5 bits (93), Expect = 6e-04
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Frame = +3
Query: 90 VQSISPSLHSPKMGKXKPHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQ 266
++S+ +L K HI N+ ++ HVD GK++ L+ I R
Sbjct: 1 MESLETALKQAAATKPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA-------- 52
Query: 267 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 446
G +Y +D + E+ RGIT+ + + +ID+PGH DF + +
Sbjct: 53 ----GKLRY---MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALI 105
Query: 447 QADCAVLIV 473
+D A+L++
Sbjct: 106 LSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 41.5 bits (93), Expect = 6e-04
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Frame = +3
Query: 90 VQSISPSLHSPKMGKXKPHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQ 266
++S+ +L K HI N+ ++ HVD GK++ L+ I R
Sbjct: 1 MESLETALKQAAATKPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA-------- 52
Query: 267 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 446
G +Y +D + E+ RGIT+ + + +ID+PGH DF + +
Sbjct: 53 ----GKLRY---MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALI 105
Query: 447 QADCAVLIV 473
+D A+L++
Sbjct: 106 LSDIALLLI 114
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 37.5 bits (83), Expect = 0.011
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
Frame = +3
Query: 147 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 320
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 321 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 482
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284
Query: 483 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 662
+ GI+ TREH L L + ++ + KMD + ++I K+VS+ +
Sbjct: 285 ----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD----RQGLKKIIKDVSNLVA 333
Query: 663 KIG 671
K G
Sbjct: 334 KAG 336
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 381 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 560
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 561 KQLIVGVNKMDSTEPPYSEPRFEEI 635
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 36.7 bits (81), Expect = 0.018
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Frame = +3
Query: 141 PHI--NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 314
PHI N+ + GH+ GK+T L+ ++T +F + E F ++K
Sbjct: 129 PHIMRNVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQ 179
Query: 315 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 488
+ + + I + Y + IID PGH +F M AD V++V A G
Sbjct: 180 RGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 36.7 bits (81), Expect = 0.018
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Frame = +3
Query: 141 PHI--NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 314
PHI N+ + GH+ GK+T L+ ++T +F + E F ++K
Sbjct: 4 PHIMRNVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQ 54
Query: 315 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 488
+ + + I + Y + IID PGH +F M AD V++V A G
Sbjct: 55 RGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 586 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 458
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.40
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +3
Query: 390 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 569
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 570 IVGVNKMDSTEPPYSEPR 623
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 228 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 329
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 228 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 329
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 147 INIVVIGHVDSGKSTTT 197
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.9
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 569 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 411
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 410 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 291
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = +3
Query: 414 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 581
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 582 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGWH 716
D EP P EP +EEI + Y + + P + PI H
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVH 558
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = +3
Query: 414 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 581
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 582 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGWH 716
D EP P EP +EEI + Y + + P + PI H
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVH 583
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 384 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 479
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,622,381
Number of Sequences: 27780
Number of extensions: 363545
Number of successful extensions: 1132
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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