Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_N21
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1128 + 34314866-34315294,34315365-34315440,34315548-343156... 227 9e-60
05_01_0120 - 828834-831143 33 0.30
10_08_0006 - 14035990-14036135,14036246-14036339,14036845-140371... 32 0.52
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 31 0.90
02_05_0158 - 26362259-26362695,26363732-26363903 31 0.90
10_01_0026 - 351737-353443 30 1.6
03_05_0267 - 22538631-22539452 30 1.6
07_03_1507 - 27228032-27228742 30 2.1
02_01_0302 - 2021221-2023305 30 2.1
03_04_0066 + 17003276-17004067 29 2.8
01_05_0236 + 19685569-19685661,19686509-19686775,19686854-196869... 29 2.8
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 29 3.6
07_03_0565 - 19561078-19561425,19562253-19563746 29 3.6
05_07_0165 + 28107093-28108457 29 3.6
11_06_0610 - 25449085-25453284 29 4.8
08_02_1033 - 23813410-23813525,23813895-23814343,23815677-238159... 29 4.8
06_03_1303 + 29180837-29181205,29181289-29181306,29181337-291816... 29 4.8
06_03_0061 + 16111250-16111588,16111607-16111738,16112006-161121... 29 4.8
05_03_0458 + 14280953-14281866,14281964-14282912 29 4.8
03_04_0220 - 18741485-18741915,18742007-18742190 29 4.8
03_01_0515 - 3864796-3865425 29 4.8
08_01_0259 + 2123393-2123555,2123670-2124070 28 6.4
02_03_0246 - 16807619-16808145,16808208-16808868 28 6.4
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 28 8.4
05_07_0008 - 27007919-27007944,27008070-27008127,27008218-270082... 28 8.4
>02_05_1128 +
34314866-34315294,34315365-34315440,34315548-34315631,
34315729-34315784,34316302-34316358,34316459-34316508,
34316587-34316739,34316842-34316992,34317469-34317633
Length = 406
Score = 227 bits (554), Expect = 9e-60
Identities = 110/186 (59%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Frame = +3
Query: 156 RPEHQAPPEVFYNDEEARKYTQNSRIIEIQGQMTERXXXXXXXXXXXXXXXXX-IGCGSG 332
RPE QAPPE+FYN+ EARKYT +SRIIEIQ ++TER IGCGSG
Sbjct: 114 RPEVQAPPEIFYNESEARKYTTSSRIIEIQSRITERALELLALPNDGVPKLLLDIGCGSG 173
Query: 333 LSGTVLEENGHMWIGMDISSSMLDVAVERDTEGGLVLADMGEGVPFRAGCFDGAVSVSAI 512
LSG L E GH WIG DIS SMLDVA+ER+ EG L+LADMG+G+ R G DGA+S+SA+
Sbjct: 174 LSGETLTEQGHHWIGYDISKSMLDVALEREAEGDLLLADMGQGLGLRPGVIDGAISISAV 233
Query: 513 QWLFNADKKTHNPVKRLNKFFTTLYSSLSRSARAVFQFYPENEKQLXLLXTQAMKAGFYG 692
QWL NADK HNP RL FF +LY L+R ARAV QFY +N KQ ++ T AM+AGF G
Sbjct: 234 QWLCNADKSCHNPRLRLKAFFGSLYRCLARGARAVLQFYADNVKQSEMIVTAAMRAGFAG 293
Query: 693 GVVIDY 710
GVV+D+
Sbjct: 294 GVVVDW 299
>05_01_0120 - 828834-831143
Length = 769
Score = 32.7 bits (71), Expect = 0.30
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = -1
Query: 517 HCIADTDTAPS-KQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSSTV 341
H A+ T+P P+ + S IS++ S SLS +TSS + + FS + V
Sbjct: 492 HLAAEASTSPPFLSPSSLSSDSSISSKYSSDSPSLSPSTSS-PTSLGLSPASSNFSHTLV 550
Query: 340 PDNPEPHPISNNKHDESSG---NRSNSKHLSV 254
P + P S+N+ SG RS SK S+
Sbjct: 551 PSSRSPLHQSSNEEPSKSGLGSIRSPSKTSSI 582
>10_08_0006 -
14035990-14036135,14036246-14036339,14036845-14037176,
14038040-14038094,14038682-14038750,14038940-14039039,
14039212-14039255,14039705-14039873,14040262-14040333,
14040439-14040519,14040586-14040650,14040796-14041260
Length = 563
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = -1
Query: 493 APSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSSTVPDNPEPHPI 314
+PS A +G + R PPS SLS AT+ +DD + P P +S + P P P
Sbjct: 8 SPSHSGATSGGGASHRKRKLPPS-SLSDATADEDDDTTAP--SSPSTSPSSPSRPS-SPS 63
Query: 313 SNNKHDE 293
S++ D+
Sbjct: 64 SSHSDDD 70
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -1
Query: 472 LNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSSTVPDNPEPHPISNNKHDE 293
LN T P + P SL SSI+ S P IC SS++ P+N +P+ + + D
Sbjct: 343 LNSTCPPPPLFPRYPLQSLRADKSSIKGGCSYPPCICK-SSTSKPENLSHYPVQSLQADR 401
Query: 292 S 290
S
Sbjct: 402 S 402
>02_05_0158 - 26362259-26362695,26363732-26363903
Length = 202
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = -1
Query: 538 FLSALNNHCIADTDTAPSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICP 359
F+ + HC A + A TP+P ++ + PPS + + AT S + M P
Sbjct: 104 FICGTSGHCSGGMKLAVTVSAAAATTPTPTAS-SSPPSTA-TPATPSSDPGMDTP----- 156
Query: 358 FSSSTVPDNPEPHPISNNKHDESSGNRSNSKHLSVI 251
S+ PD + K S+G S S+ SV+
Sbjct: 157 ---SSTPDATTTPTTTTTKSTGSTGGASGSEARSVM 189
>10_01_0026 - 351737-353443
Length = 568
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/76 (28%), Positives = 31/76 (40%)
Frame = -1
Query: 502 TDTAPSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSSTVPDNPEP 323
T +APS +L+ +PSP S + PP S + S +S P S S+ P
Sbjct: 16 TPSAPSPSSSLSKSPSPPSPSSPPPPASTNAPPKS-AGGVSSSTQAQPSSESSSESTTTP 74
Query: 322 HPISNNKHDESSGNRS 275
+ K SS S
Sbjct: 75 SAPAERKSGGSSRGES 90
>03_05_0267 - 22538631-22539452
Length = 273
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -1
Query: 493 APSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPI 371
+PS PA +PSP ART PPS S S S+ S P+
Sbjct: 184 SPSSPPA---SPSPSPARTSPPSSSPSRGCSARRPTPSPPV 221
>07_03_1507 - 27228032-27228742
Length = 236
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 502 TDTAPSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSSTVP 338
T +A +P G PS S+RT PP S S A + D P + P +S P
Sbjct: 86 TPSASPFRPPTAGAPSSSSSRTAPPPSSASAAVPVVAVDRGEPKTV-PLASPFPP 139
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -1
Query: 481 QPALNGTPSPISART----KPPSVSLSTATSSIEDDMSIPIHICPFSSSTVPDNPEPHPI 314
+P+ PSP + T PPS S + + S + P H P SSST P + P P
Sbjct: 477 KPSTPSHPSPPGSTTPSYPSPPSSSTTPSYHSPPQGHTTPSHPSPPSSSTAPPSHSP-PQ 535
Query: 313 SNNKH 299
S H
Sbjct: 536 STPTH 540
>03_04_0066 + 17003276-17004067
Length = 263
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 463 TPSPISARTKPP-SVSLSTATSSIEDDMSIPIHICPFSSST 344
+P S R KPP + S T T + DD ++P P SSST
Sbjct: 94 SPESTSFRKKPPPAASSETTTYNYNDDDNLPKMQVPSSSST 134
>01_05_0236 +
19685569-19685661,19686509-19686775,19686854-19686940,
19688637-19688681,19689029-19689064
Length = 175
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 331 PEPHPISNNKHDESSGNRSNSKHLSVICPWISMILEFC 218
P P P+S K S +RS ++++ W+ M+ + C
Sbjct: 131 PLPKPLSIAKTSPSQSSRSECMRIAMVLGWVIMVAQEC 168
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 511 IADTDTAPSKQPALNGTPSPISARTKPPSVSLSTATS 401
+AD D AP+ PA NG P + PP + A+S
Sbjct: 12 VADADPAPAPAPAANGPARPDRSSYVPPHLRNRGASS 48
>07_03_0565 - 19561078-19561425,19562253-19563746
Length = 613
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = -1
Query: 490 PSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSSTVPDNPEPHPIS 311
P P+L +P P S KP + S +++ S P+++ S V DN +P I
Sbjct: 528 PMSSPSLLVSPGPGSIMHKPDTQKSSYLKWGLKNSRSKPVNL-----SQVADNTDPFTIP 582
Query: 310 NNKHDESSGNRSNSKHLS 257
++ S G++ K S
Sbjct: 583 SDYTWVSLGSKGQDKKSS 600
>05_07_0165 + 28107093-28108457
Length = 454
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 514 CIADTDTAPSKQPALNGTPSPI 449
C+A AP + PA NGTP P+
Sbjct: 216 CMATIGPAPYRHPADNGTPGPV 237
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/64 (29%), Positives = 24/64 (37%)
Frame = -1
Query: 493 APSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSSTVPDNPEPHPI 314
AP PA+ G SP + PP S S E + P P + + P PE P
Sbjct: 491 APPPAPAIKGVTSPPAEYGAPPPPSSGWLPKSPERKKAPPPQAEPPTEYSPPATPESSPP 550
Query: 313 SNNK 302
K
Sbjct: 551 PEGK 554
>08_02_1033 -
23813410-23813525,23813895-23814343,23815677-23815990,
23817021-23817809
Length = 555
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 388 HLQCLMLL*RETLKVV*FWLIWVKVSRLEQVALMEQYPYQLY 513
+L CL L +K+ W+ W KV+ L + + PY LY
Sbjct: 279 NLLCLKLAEEIGVKIANPWISWFKVASLPAIISLLATPYLLY 320
>06_03_1303 +
29180837-29181205,29181289-29181306,29181337-29181622,
29185008-29186284,29186499-29187005
Length = 818
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 493 APSKQPALNGTPSPISARTKPPSVSLSTATSS 398
APS P+ + +PSP ++ T P ST T++
Sbjct: 528 APSPSPSPSPSPSPSASATTPTQTGTSTTTTT 559
>06_03_0061 +
16111250-16111588,16111607-16111738,16112006-16112170,
16112278-16112319,16112418-16113179
Length = 479
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 565 FSLFTGL*VFLSALNNHCIADTDTAPSKQPA-LNGTPSPISARTKPPSVSLS 413
F L V S L+ C+A TD+ + PA +G P P+S PP+ + S
Sbjct: 16 FPFLLVLVVTSSFLSGRCLATTDSHHRRPPAGRHGPPRPVSP-PSPPATTFS 66
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = -1
Query: 499 DTAPSKQPALNGTPSPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSSTVPDNPEPH 320
+ APS P+ N TP+ + T PPS+ T TSS S P + P T P P P
Sbjct: 28 NAAPSP-PSSNSTPTSSTTPTVPPSL---TTTSSPSSSPSSPPPLPPL-QPTPPPLP-PT 81
Query: 319 PISNNKH 299
+S + H
Sbjct: 82 TLSCSSH 88
Score = 27.9 bits (59), Expect = 8.4
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Frame = -1
Query: 502 TDTAPSKQPALNGTPSPISARTKPPSV--------SLSTATSSIEDDMSIPIHICPF--- 356
+ T P+ P+L T SP S+ + PP + L T S + P P
Sbjct: 42 SSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSP 101
Query: 355 SSSTVPDNPEPHPISNNKHDESSGNRSNSKHLSVICP 245
S+S++P P P S++K + ++ ++ LS P
Sbjct: 102 SASSLPPVPTPRSASSSKCSAPTSAQTPTRFLSSSSP 138
>03_04_0220 - 18741485-18741915,18742007-18742190
Length = 204
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 471 RAGCFDGAVSVSAIQWLFNADKKTHNPVKRLNKFF 575
R GC DG V +QW+ AD + H V + KFF
Sbjct: 10 RKGCSDGCVLRPCLQWIDAADAQGHATV-FVAKFF 43
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -1
Query: 502 TDTAPSKQPALNGTP-SPISARTKPPSVSLSTATSSIEDDMSIPIHICPFSSSTVPDNPE 326
T AP+ P +P SP + + PP + TSS + P+ P +V +P
Sbjct: 25 TTAAPAPSPEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPP 84
Query: 325 PHPI 314
P P+
Sbjct: 85 PPPL 88
>08_01_0259 + 2123393-2123555,2123670-2124070
Length = 187
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = -1
Query: 553 TGL*VFLSALNNHCIADTDTAPSKQPAL--NGTPSPISARTKPPSVSLSTATSSIEDDMS 380
TG F+ N HC A + A N PSP++ R + P+ A
Sbjct: 97 TGTRYFICGFNGHCTGGMKVAVKVEAATGSNPAPSPMTPRPRTPTAMAPNAMPPTAGGRP 156
Query: 379 IP 374
+P
Sbjct: 157 VP 158
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 502 TDTAPSKQPALNGTPSPISARTKPPSVSLSTATSSIED 389
T A ++ P + TP P SA+ PP V T+ ED
Sbjct: 136 TPPATARAPRTSSTPGPPSAQAPPPPVIDRTSIPERED 173
>09_04_0245 + 15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = +3
Query: 468 FRAGCFDGAVSVSAIQWLFNADKKTHNPVKRLNKFFTTLYSSLSRSARAVFQFYPENEKQ 647
FR GC G + ++ NAD + H V T S L A + +P
Sbjct: 1137 FRIGCLPGNLILTCFSQGANADPRKHREVCATAVDPVTPSSILVAIAASYCFLFPTASSL 1196
Query: 648 LXLLXTQAM--KAG--FYGGVVIDY 710
L + M KAG FYG ++D+
Sbjct: 1197 LTPILWHIMVGKAGSSFYGDYILDF 1221
>05_07_0008 -
27007919-27007944,27008070-27008127,27008218-27008292,
27008417-27008470,27008574-27008840,27008913-27009193,
27009268-27009409,27009491-27009601,27009975-27010013,
27010173-27010310,27010415-27010552,27011438-27011562,
27011702-27011723
Length = 491
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 315 IGCGSGLSGTVLEEN--GHMWIGMDISSSMLDVAVER 419
+GCG G + EN H+ +G+D+S +M+ A+ER
Sbjct: 259 VGCGIGGGDFYMAENYDAHV-LGIDLSINMVSFAIER 294
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,669,044
Number of Sequences: 37544
Number of extensions: 353985
Number of successful extensions: 1322
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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