Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_N21
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.0  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   4.1  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   9.5  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 415 STATSSIEDDMSIPIHICPFSSSTVPDNPEP 323
           S+AT S++DD  + I   P  +S+  ++P P
Sbjct: 347 SSATPSVDDDEDVVIGRLPADNSSALNSPNP 377


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +2

Query: 320 MWFRIIWYSARRKWTYVDWDG 382
           +W R++W   + +W   D+ G
Sbjct: 77  VWLRLVWSDYQLQWDEADYGG 97


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 469 NGTPSPISARTKPPS 425
           +GTP+P + R +PP+
Sbjct: 54  DGTPAPSTVRPRPPA 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,139
Number of Sequences: 2352
Number of extensions: 13832
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)