Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_N15
(567 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 214 1e-54
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 207 1e-52
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 200 2e-50
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 199 4e-50
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 198 7e-50
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 198 1e-49
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 195 7e-49
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 194 9e-49
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 190 1e-47
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 188 8e-47
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 184 1e-45
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 182 7e-45
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 177 1e-43
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 176 3e-43
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 174 1e-42
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 174 1e-42
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 169 4e-41
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 168 9e-41
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 165 5e-40
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 165 6e-40
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 165 6e-40
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 163 2e-39
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 163 2e-39
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 161 1e-38
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 156 4e-37
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 155 7e-37
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 148 8e-35
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 140 2e-32
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 139 5e-32
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 136 4e-31
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 136 4e-31
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 134 1e-30
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 134 1e-30
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 133 3e-30
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 125 8e-28
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 122 6e-27
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 117 2e-25
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 112 6e-24
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 110 2e-23
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 109 4e-23
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 106 3e-22
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 105 5e-22
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 103 2e-21
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 103 3e-21
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 103 4e-21
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 102 5e-21
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 101 2e-20
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 100 3e-20
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 100 5e-20
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 100 5e-20
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 98 1e-19
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 98 1e-19
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 96 6e-19
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 94 2e-18
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 92 7e-18
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 90 4e-17
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 90 4e-17
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 89 5e-17
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 89 5e-17
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 89 7e-17
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 87 2e-16
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 86 5e-16
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 86 6e-16
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 86 6e-16
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 84 2e-15
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 84 3e-15
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 83 3e-15
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 83 3e-15
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 83 4e-15
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 82 1e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 81 1e-14
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 81 2e-14
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 80 4e-14
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 80 4e-14
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 79 5e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 79 5e-14
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 79 9e-14
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 78 1e-13
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 76 7e-13
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 73 5e-12
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 73 5e-12
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 73 6e-12
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 73 6e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 6e-12
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 72 1e-11
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 68 1e-10
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 66 5e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 61 2e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 6e-08
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 59 8e-08
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 58 2e-07
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 57 3e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 56 6e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 53 4e-06
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 49 9e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 1e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 48 2e-04
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 46 5e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 45 0.001
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.031
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 40 0.054
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 36 0.50
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 1.5
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 35 1.5
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 6.2
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 6.2
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 8.1
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 214 bits (523), Expect = 1e-54
Identities = 109/168 (64%), Positives = 117/168 (69%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+PL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH
Sbjct: 53 NWLIPLMLGAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHG 112
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIFSLHLAGISS SFDQ+PLF+ AVGITA
Sbjct: 113 GSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSL 172
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILI 546
AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF F GHPEVYILI
Sbjct: 173 PVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 207 bits (506), Expect = 1e-52
Identities = 106/164 (64%), Positives = 114/164 (69%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH
Sbjct: 77 NWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHG 136
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 137 GSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSL 196
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEV 534
AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF F GHP++
Sbjct: 197 PVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 200 bits (488), Expect = 2e-50
Identities = 105/175 (60%), Positives = 116/175 (66%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHA 140
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 141 GASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSL 200
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F GHPEVYILILPGFG+I
Sbjct: 201 PVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMI 255
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 199 bits (485), Expect = 4e-50
Identities = 103/175 (58%), Positives = 114/175 (65%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDL IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 140 GASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSL 199
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F GHPEVYILILPGFGII
Sbjct: 200 PVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGII 254
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 198 bits (483), Expect = 7e-50
Identities = 99/175 (56%), Positives = 116/175 (66%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N VP+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H
Sbjct: 83 NWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHS 142
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G +VDLAIFSLHL+G+SS + +LPLFV +V +TAF
Sbjct: 143 GGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSL 202
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF F GHPEVYILILPGFGII
Sbjct: 203 PVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGII 257
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 198 bits (482), Expect = 1e-49
Identities = 99/175 (56%), Positives = 115/175 (65%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSL 199
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF F GHPEVYILI+PGFG++
Sbjct: 200 PVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMV 254
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 195 bits (475), Expect = 7e-49
Identities = 100/175 (57%), Positives = 114/175 (65%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDL IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 140 GASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSL 199
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F GHPEVYILILPGFG+I
Sbjct: 200 PVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMI 254
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 194 bits (474), Expect = 9e-49
Identities = 100/175 (57%), Positives = 114/175 (65%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHP 139
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDL IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 140 GASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSL 199
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F GHPEVYILILPGFG+I
Sbjct: 200 PVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMI 254
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 190 bits (464), Expect = 1e-47
Identities = 96/175 (54%), Positives = 115/175 (65%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVP+++G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H
Sbjct: 88 NWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHS 147
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G +VDLAIFSLH++G SS S ++PLFV ++ +TAF
Sbjct: 148 GGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAV 207
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF F GHPEVYILILPGFG+I
Sbjct: 208 PVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMI 262
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 188 bits (458), Expect = 8e-47
Identities = 95/175 (54%), Positives = 111/175 (63%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+PL+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H
Sbjct: 64 NWLIPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHG 123
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDL IFSLHLAG SS + D++ LF +V ITA
Sbjct: 124 GMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSL 183
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF F GHPEVYILILPGFGII
Sbjct: 184 PVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGII 238
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 184 bits (448), Expect = 1e-45
Identities = 95/175 (54%), Positives = 111/175 (63%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 141 GPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSL 200
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
+ IT+LL DRN NTSFF+ +GGGDPILY+HLF F GHPEVYILI+PGFGII
Sbjct: 201 PVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGII 255
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 182 bits (442), Expect = 7e-45
Identities = 93/175 (53%), Positives = 110/175 (62%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N ++PL++GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIFSLHL ISS S ++PLFV A+ ITAF
Sbjct: 141 GPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSL 200
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
+ IT+LL DRN NTSFF+ AGGGDPI YQH F F GHPEVYILI+PGFGI+
Sbjct: 201 PVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIV 255
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 177 bits (432), Expect = 1e-43
Identities = 93/175 (53%), Positives = 106/175 (60%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+PL LG PD+ FPR+NNI + +ENG GTG T+YPPLS +H
Sbjct: 81 NFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHS 140
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIF LHL+GISS +L LF AV ITA
Sbjct: 141 GPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSL 200
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
AG IT++LTDRN NTSFF+ AGGGDPILYQHLF F GHPEVYILI+PGFGII
Sbjct: 201 PVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGII 255
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 176 bits (428), Expect = 3e-43
Identities = 88/175 (50%), Positives = 103/175 (58%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N VP+++GAPD++FPR+NN F E G GTG TVYPPLSS +H
Sbjct: 84 NYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHS 143
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDL IFS HL GI S LPLFV +V +T+F
Sbjct: 144 GASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAI 203
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A AIT+LL DRN NTSF+DP GGGD +LYQHLF F GHPEVYILILPGFG++
Sbjct: 204 PVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLV 258
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 174 bits (424), Expect = 1e-42
Identities = 89/175 (50%), Positives = 106/175 (60%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H
Sbjct: 107 NFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHS 166
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
VDL IF LHL+GISS +L LF AV ITA
Sbjct: 167 SMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSL 226
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF F GHPEVYILI+PGFGII
Sbjct: 227 PVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGII 281
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 174 bits (423), Expect = 1e-42
Identities = 91/156 (58%), Positives = 108/156 (69%)
Frame = -2
Query: 509 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 330
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 329 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 150
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 149 LEINNIREGGRSQXLILFIRGNAISGAPSIRGTNQF 42
L + ++EGG +Q L+LFIRGNA+SGAP++ GTNQF
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQF 155
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 169 bits (411), Expect = 4e-41
Identities = 88/156 (56%), Positives = 98/156 (62%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL+LGAPD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH
Sbjct: 63 NWLVPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHA 122
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIFSLHLAG+SS + + LFV +V ITA
Sbjct: 123 GPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSL 182
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 510
AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 183 PVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 168 bits (408), Expect = 9e-41
Identities = 79/175 (45%), Positives = 108/175 (61%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +PL++GAPD+AFPR+NN+ + +++ GAG G T YPP+S+
Sbjct: 186 NYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVET 245
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
R+VD AIF++H++G SS + ++PLF +V +TA+
Sbjct: 246 SRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSL 305
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F F GHPEVYI+ILP FG+I
Sbjct: 306 PVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVI 360
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 165 bits (402), Expect = 5e-40
Identities = 89/179 (49%), Positives = 108/179 (60%), Gaps = 4/179 (2%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSN 210
N VP+++GAPD+AFPR+NNI F V NGAGTG TVY PLS++
Sbjct: 120 NWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS 179
Query: 211 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 390
G +VD+AI SLH+AG SS + ++PLFV +V +TAF
Sbjct: 180 -GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLL 238
Query: 391 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A AIT+LLTDRN T+F+D AGGGDP LYQHLF F GHPEVYI+ILPGFGII
Sbjct: 239 LLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGII 297
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 165 bits (401), Expect = 6e-40
Identities = 86/160 (53%), Positives = 100/160 (62%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N VPL++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+S AH
Sbjct: 81 NWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHS 140
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVD+AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 141 GGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSL 200
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXG 522
AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF F G
Sbjct: 201 PVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 165 bits (401), Expect = 6e-40
Identities = 85/156 (54%), Positives = 98/156 (62%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSL 199
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 510
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 200 PVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 163 bits (397), Expect = 2e-39
Identities = 80/175 (45%), Positives = 107/175 (61%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A +T+LL DRN NTSFF +GGGDP+LY+H+F F GHPEVYILI+P FG++
Sbjct: 218 PVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVV 272
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 163 bits (397), Expect = 2e-39
Identities = 80/175 (45%), Positives = 107/175 (61%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A +T+LL DRN NTSFF +GGGDP+LY+H+F F GHPEVYILI+P FG++
Sbjct: 218 PVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVV 272
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 161 bits (391), Expect = 1e-38
Identities = 88/156 (56%), Positives = 97/156 (62%)
Frame = +1
Query: 58 LILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 237
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 238 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 417
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 418 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGH 525
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 156 bits (378), Expect = 4e-37
Identities = 85/179 (47%), Positives = 103/179 (57%), Gaps = 4/179 (2%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSN 210
N L+PL++G PD+AFPR+NNI F I+E G GTG T+ YPPLS
Sbjct: 109 NFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGL 168
Query: 211 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 390
+H G SVDLAIF+LHL+G+SS +L LF +
Sbjct: 169 QSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALF-------GWAT 221
Query: 391 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
IT++LTDRN NTSFF+ AGGGDPIL+QHLF F GHPEVYILI+PGFGII
Sbjct: 222 WSSRSRYFLGITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGII 280
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 155 bits (376), Expect = 7e-37
Identities = 83/169 (49%), Positives = 100/169 (59%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 141 GPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSL 200
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILIL 549
+ IT+LL DRN NTSFF+ +GGGDPILY+HLF F G I++L
Sbjct: 201 PVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 148 bits (359), Expect = 8e-35
Identities = 78/160 (48%), Positives = 95/160 (59%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N ++PL++GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH
Sbjct: 81 NYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHS 140
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIF+LH+ ISS + +LPLFV A+ ITA
Sbjct: 141 GPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTL 200
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXG 522
+ +T+LL DRN NTSFF+ AGGGDPILY+HLF F G
Sbjct: 201 PVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 140 bits (340), Expect = 2e-32
Identities = 76/169 (44%), Positives = 95/169 (56%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+PL+LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHS 145
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G +VDLAIFSLHL+G SS ++ +PLF AV TA
Sbjct: 146 GPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSL 205
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILIL 549
A +T+ + DRN NTSFF+ AGGGD +LYQHLF + HPEV I+ L
Sbjct: 206 PVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 139 bits (336), Expect = 5e-32
Identities = 72/171 (42%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGH--PEVYILIL 549
A +T+LL DRN NTSFF +GGGDP+LY+H+F F G P + I+I+
Sbjct: 218 PVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 136 bits (328), Expect = 4e-31
Identities = 70/175 (40%), Positives = 92/175 (52%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N ++PL+LGAP++AFPR+N + F + G G+ T YPPLS
Sbjct: 91 NWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQP 149
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
S+D I LH GI S + DQ+ +FV +T+F
Sbjct: 150 ELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSV 209
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
AG++ LL DRN NTSF+D GG+P+LYQHLF F GHPEVY++ILP FGII
Sbjct: 210 PVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGII 264
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 136 bits (328), Expect = 4e-31
Identities = 70/175 (40%), Positives = 92/175 (52%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +P++ G PD+ FPR+NN+ F + E G G G T+YP L H
Sbjct: 83 NYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHS 142
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
+ D +F++HL GISS SF LF+ A ITA
Sbjct: 143 SLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITL 202
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
AG +T++L DRN NTSF+D GGGD IL+QH+F F GHPEVYI++LP FG+I
Sbjct: 203 PVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLI 257
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 134 bits (324), Expect = 1e-30
Identities = 73/143 (51%), Positives = 84/143 (58%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH
Sbjct: 69 NWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHA 128
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDL IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 129 GASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSL 188
Query: 403 XXXAGAITILLTDRNLNTSFFDP 471
A IT+LLTDRNLNT+FFDP
Sbjct: 189 PVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 134 bits (324), Expect = 1e-30
Identities = 67/156 (42%), Positives = 91/156 (58%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILAL 217
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 510
A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 218 PVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 133 bits (321), Expect = 3e-30
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 1/176 (0%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +PL++ D++ PR+NN+ + G G G T+YPPLS++
Sbjct: 82 NWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMD 141
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXX 399
G +DLA+FSLH+AG+SS F L P+ + + T+
Sbjct: 142 GLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTS 201
Query: 400 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF F GHPEVYILILP FG+I
Sbjct: 202 VPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVI 257
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 125 bits (301), Expect = 8e-28
Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +P++ G+P++A+PRIN+I E G GTG T+YPPLS+++
Sbjct: 85 NYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSL 144
Query: 223 GR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 399
+VD+ IF L ++G++S + L + ++ IT+
Sbjct: 145 SPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLT 204
Query: 400 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
G + +LL+D + NT FFDP GDPILYQHLF F GHPEVYILILP FG+I
Sbjct: 205 LPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVI 260
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 122 bits (294), Expect = 6e-27
Identities = 63/175 (36%), Positives = 91/175 (52%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L P++LG D+ +PR+N +E G+GTG T+YPPLS+++++
Sbjct: 88 NYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNV 147
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G +D IF L AGI+S D++ ++ +T+F
Sbjct: 148 G--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSL 205
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
++ DR+ NT FF+ + GDP+LYQHLF F GHPEVYI+ILPGFGII
Sbjct: 206 PVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGII 260
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 117 bits (281), Expect = 2e-25
Identities = 70/175 (40%), Positives = 88/175 (50%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +P+ L D+ PR+N++ G G G T+YPPLS
Sbjct: 178 NYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEGS 234
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G VD +FSLHLAG+SS S + V A T+
Sbjct: 235 GFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSL 289
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A IT+LL DRN T+FF+P+GGGDPIL+QHLF F GHPEVY+LILPGFGI+
Sbjct: 290 PVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIV 344
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 112 bits (269), Expect = 6e-24
Identities = 64/181 (35%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAH 219
N L+PL++GA D+AFPR+N F G AG G T Y PLS+N+
Sbjct: 112 NLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGM 171
Query: 220 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 399
G L + ++ + G+SS ++ +LPL + + +TA
Sbjct: 172 PGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTAILNALF 231
Query: 400 XXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FXGHPEVYILILPGFGI 564
A +LL DR+ T FF GGGDPIL+QHLF GHPEVYI+ILP +GI
Sbjct: 232 VPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGI 291
Query: 565 I 567
+
Sbjct: 292 L 292
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 110 bits (265), Expect = 2e-23
Identities = 63/175 (36%), Positives = 83/175 (47%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N VPL++GA D+AFPR+N+ F + + G Y PLSS
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSS 158
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
+ VD I L + GI S S ++PLFV + + A
Sbjct: 159 LQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILAL 218
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A+ +LL DR L ++FFDP GG +L+QH F GHPEVYILILPGFG+I
Sbjct: 219 PALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMI 273
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 109 bits (262), Expect = 4e-23
Identities = 65/174 (37%), Positives = 90/174 (51%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+P PD+ FPR+N + F ++ + A G T YPPLSS
Sbjct: 75 NLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----L 125
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
SV+ ++FSLHLAGI+S + L LF ++ + +
Sbjct: 126 SPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSL 183
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
A IT++LTD++L T F+D GGDP+LYQHLF F GHPEVY++ILP FG+
Sbjct: 184 PVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGL 237
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 106 bits (255), Expect = 3e-22
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 219
N L+P+++G +++ PR+N I F ++ +G T+YPPLS+ A
Sbjct: 90 NYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDAD 149
Query: 220 R-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 396
G ++DL++ +H+ GISS +F + ++ ++ +T+
Sbjct: 150 NIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIG 209
Query: 397 XXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
AIT LL DRN+N++ +D G DP+LYQHLF F GHPEVY++ILP FG+
Sbjct: 210 SLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGL 263
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 105 bits (253), Expect = 5e-22
Identities = 65/175 (37%), Positives = 82/175 (46%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+PL++G D+AFPR+N + F V G T YPPLS
Sbjct: 94 NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKW 152
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G +L I SL L G SS +PLF A+ T+
Sbjct: 153 GE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLST 210
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A A+ +L D TSFF+P GGGDP++YQHLF F HP VYI+ILP FG+I
Sbjct: 211 PVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVI 265
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 103 bits (248), Expect = 2e-21
Identities = 60/173 (34%), Positives = 84/173 (48%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+PL++GA D+AFPR+N + + I N T T YPP S N +
Sbjct: 38 NFLLPLMIGAKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--ND 95
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
L +F +HL G SS +F + LFV +
Sbjct: 96 AGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGV 155
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFG 561
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F HP VY+ +LP FG
Sbjct: 156 PSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFG 208
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 103 bits (247), Expect = 3e-21
Identities = 57/125 (45%), Positives = 68/125 (54%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 140 GGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSL 199
Query: 403 XXXAG 417
AG
Sbjct: 200 PVLAG 204
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 103 bits (246), Expect = 4e-21
Identities = 58/173 (33%), Positives = 82/173 (47%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
LVPL++G IAFPR+N + V+ G G Y PLS G+
Sbjct: 98 LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGK 157
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
D+ + +S+ S D++PLFV ++ +T+F
Sbjct: 158 RADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPA 217
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A T L+ DR + T FF+PA GGD +L+QHLF F GHPEVYI+ LP G++
Sbjct: 218 IMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMV 270
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 102 bits (245), Expect = 5e-21
Identities = 60/177 (33%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNI 213
N L+P ++GAPD+AFP++N F G A +G YPP+S + +
Sbjct: 103 NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPL 162
Query: 214 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 393
H L I ++ L+GISS F ++P+FV
Sbjct: 163 GHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQL 222
Query: 394 XXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
G +LL D + TSFF P GGGDP+L+QH F F HP VY+L+LP FGI
Sbjct: 223 IGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGI 279
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 101 bits (241), Expect = 2e-20
Identities = 72/183 (39%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXX--XXXXXXXXXXXIVEN-GAGTG*TVYPPLS--- 204
N L+PL++GA D+AFPRIN I F I E A TG T+Y PLS
Sbjct: 161 NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGE 220
Query: 205 --SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 378
N A+ G VDL + LHL+G+S+ S+ L +F +
Sbjct: 221 GMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQ 278
Query: 379 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGF 558
+ AI +LL DRN TSFF AG G IL+QHLF F GHPEVYI++LP
Sbjct: 279 SGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPM 336
Query: 559 GII 567
GII
Sbjct: 337 GII 339
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 100 bits (239), Expect = 3e-20
Identities = 61/175 (34%), Positives = 79/175 (45%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +VPL++GA D+AFPR+N + V G Y PL+
Sbjct: 98 NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAP 157
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
VD I + L G++S + +++PLFV + AF
Sbjct: 158 TAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAF 217
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A LL DR+ T FF P GGD +L+QHLF F GHPEVYILILP GII
Sbjct: 218 PVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGII 272
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 99.5 bits (237), Expect = 5e-20
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N ++PL+LGA D+AFPR+N + ++ G TG T Y P S AH
Sbjct: 110 NFMLPLMLGAKDVAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGWTFYTPYS---AHT 165
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
+V +F + G SS ++ ++PLFV A+ T+
Sbjct: 166 TTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATSCIQVLAT 225
Query: 403 XXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
G + +L+T NL FDPA GGDP+L+QHLF F HP VYI++LP FG++
Sbjct: 226 PVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVM 280
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 99.5 bits (237), Expect = 5e-20
Identities = 60/177 (33%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIA 216
N +PL++ A D+AFPRIN I F ++ A T T+Y PLS ++
Sbjct: 135 NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS 194
Query: 217 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 396
+VD+ + LHL G+S+ + L +F + +
Sbjct: 195 --SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILF 252
Query: 397 XXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A+ +LL DRN T+FF AGG DPI +QHLF F GHPEVY+L+LP GI+
Sbjct: 253 AFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIV 308
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 97.9 bits (233), Expect = 1e-19
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 219
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 220 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 399
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 400 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
A +LL +R+L FF DPA GDP L+QH+F F GHPEVYIL+LP G+
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGL 263
Query: 565 I 567
+
Sbjct: 264 V 264
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 97.9 bits (233), Expect = 1e-19
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAH 219
N ++PL +GAPD+AFPR+N F + GA G T+Y PLS I
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHS 164
Query: 220 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 399
G D+ I + GI S + ++P+F + + +
Sbjct: 165 PGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLI 224
Query: 400 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A +L DR L +DPA GG +L+QHLF F GHPEVY+L LP FGI+
Sbjct: 225 FPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIV 279
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 95.9 bits (228), Expect = 6e-19
Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAH 219
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 220 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 399
G +DLA ++ L +S + ++P+F ++ T
Sbjct: 148 PGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWA 207
Query: 400 XXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FXGHPEVYILILPGFG 561
+LL DRNL T FF +PAGG +L+ HLF F GHPEVYIL+ P G
Sbjct: 208 FPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALG 260
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 94.3 bits (224), Expect = 2e-18
Identities = 54/175 (30%), Positives = 81/175 (46%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L+P+++GA D+AFP++N + F +V+ GA TG T Y P S+ +
Sbjct: 103 NFLLPIMIGAKDVAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYTPYSTTTITK 161
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
V L F L G SS + +LPLFV ++ T+
Sbjct: 162 VVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILAT 218
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
++ ++ + FDPA GGDP+L+QH F F HP VYI++LP +I
Sbjct: 219 PVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVI 273
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 92.3 bits (219), Expect = 7e-18
Identities = 54/174 (31%), Positives = 76/174 (43%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +VPL +GA D+AFP +NN+ F ++ G T Y PL+SN
Sbjct: 120 NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSP 179
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G + + L +AGI + + ++P+F IT
Sbjct: 180 GPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAF 239
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
A+ +L DR FF GG P+L+ +LF GHPEVYI+ILP FGI
Sbjct: 240 PVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGI 293
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 89.8 bits (213), Expect = 4e-17
Identities = 60/190 (31%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS---SN 210
N L+PL++GA D+AFP +N + + + +GA G T YPPLS ++
Sbjct: 114 NFLIPLMIGADDMAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLSDMTTS 173
Query: 211 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 390
G + L + + G+SS + +LPL + A+ ITA
Sbjct: 174 APSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGMTMFRLPLTIWAMFITALLQ 233
Query: 391 XXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FXGHPEVY 537
A ++L DR + T FF P AGGG P+L+QHLF F HP VY
Sbjct: 234 AFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVY 293
Query: 538 ILILPGFGII 567
I+ILP G++
Sbjct: 294 IMILPAMGMV 303
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 89.8 bits (213), Expect = 4e-17
Identities = 49/174 (28%), Positives = 80/174 (45%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +VPL +GA D++FP +N + F + G T Y LS + +
Sbjct: 91 NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSK 148
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G +D + L ++G+ + ++ +LPLF + +
Sbjct: 149 GHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAF 208
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
+ +++ DR T+FF+P GG+ ++++HLF GHPEVYILILP FGI
Sbjct: 209 PPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGI 262
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 89.4 bits (212), Expect = 5e-17
Identities = 55/174 (31%), Positives = 77/174 (44%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
GA+ +L DR L+ FF GG+ ++Y +LF GHPEVYIL+LP FGI
Sbjct: 245 PILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGI 298
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 89.4 bits (212), Expect = 5e-17
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAH 219
N +VPL+LGA D+A PR+N + GA G T Y P S A
Sbjct: 92 NFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQ 148
Query: 220 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 399
VD + ++ L G SS S ++P++V +V +
Sbjct: 149 SESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFS 208
Query: 400 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A ++L +R + S+F+PA GGDP+L+Q F F HP VY+++LP GI+
Sbjct: 209 LAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGIL 264
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 89.0 bits (211), Expect = 7e-17
Identities = 51/173 (29%), Positives = 77/173 (44%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
S D + + LA I+S S ++P+ + + TAF
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPP 243
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
+L +R L FFD GGDP+L+QHLF GHPEVYI+ LP G++
Sbjct: 244 LIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMV 296
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 87.4 bits (207), Expect = 2e-16
Identities = 54/174 (31%), Positives = 75/174 (43%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
A+ +L DR L+ F GG+P++Y +LF GHPEVYILILP FG+
Sbjct: 244 PILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGV 297
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 86.2 bits (204), Expect = 5e-16
Identities = 53/175 (30%), Positives = 76/175 (43%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N L PL+LG+ D+AFPR+ + + G Y PL+S
Sbjct: 116 NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSA 175
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G ++D+ + L GIS+ S D+LP+ V +
Sbjct: 176 GANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAV 235
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
+ A +L DRN T FFD A GG P+L+QHLF HP VY+++LP GI+
Sbjct: 236 PSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIV 290
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 85.8 bits (203), Expect = 6e-16
Identities = 51/173 (29%), Positives = 75/173 (43%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
+D + IS+ S +++P+FV AV + +F
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A +L DR FF A GDPIL+QHLF F GHPEVYI+ +P G++
Sbjct: 225 LVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMV 276
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 85.8 bits (203), Expect = 6e-16
Identities = 62/189 (32%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNI 213
N L+PL++GA D+ FP +N + + V G G G T+YPP + S
Sbjct: 107 NYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGT 166
Query: 214 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXX 390
+ + L + SL L I + +LPL V + T
Sbjct: 167 PGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMAL 226
Query: 391 XXXXXXXAGAITILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FXGHPEVYI 540
G++ +LL DR L TSFF P GGG P+L+QHLF F GHPEVYI
Sbjct: 227 LAFPALFVGSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYI 285
Query: 541 LILPGFGII 567
+ LP FGI+
Sbjct: 286 VALPAFGIV 294
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 84.2 bits (199), Expect = 2e-15
Identities = 57/156 (36%), Positives = 68/156 (43%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
L PL +GAP +A PR+ N+ F + G G VYPP SS +AH
Sbjct: 72 LXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSG 131
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
+VDL IF LHLAGISS ++ LF
Sbjct: 132 AVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPV 191
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 516
A AIT+L R N SFF P G P + F F
Sbjct: 192 LAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 83.8 bits (198), Expect = 3e-15
Identities = 56/175 (32%), Positives = 81/175 (46%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N VP+++ D+A+P++N I F + T PP S I+
Sbjct: 88 NYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAP 141
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G + D+ IF L + GISS S Q+PL + ++
Sbjct: 142 GPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVAL 201
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++
Sbjct: 202 PTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMM 256
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 83.4 bits (197), Expect = 3e-15
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*-TVYPPLSS---N 210
N L+PL +GA D+A +N + + +E G +G +YPPLS+
Sbjct: 128 NFLIPLQIGARDMASGFMNMLSYWFFFGSSVIMFASIFLETGPASGSWVIYPPLSALPQA 187
Query: 211 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 390
++ G + + + S+ L IS SF +LPL + A ITA
Sbjct: 188 MSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRVKGMSFTRLPLTIWAFFITAIIG 247
Query: 391 XXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FXGHPEVYI 540
A +L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI
Sbjct: 248 LLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYI 307
Query: 541 LILPGFGI 564
+++P GI
Sbjct: 308 VLIPALGI 315
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 83.4 bits (197), Expect = 3e-15
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 219
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 220 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 399
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVWGFFTTAILMIIA 196
Query: 400 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
+ +R T FFD A GG P+L+Q LF F GHPEVYILILP G++
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLV 252
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 83.0 bits (196), Expect = 4e-15
Identities = 50/173 (28%), Positives = 73/173 (42%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
L+P +LG+ D+AFPR+ F + +G +YPPLSS + G
Sbjct: 98 LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGI 157
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
+ D + + IS+ S ++P+F +TA
Sbjct: 158 NSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPP 217
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
+L +R + FF A GGD +L+QHLF GHPEVYI+ LP G I
Sbjct: 218 LILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAI 270
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 81.8 bits (193), Expect = 1e-14
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +PL++GA D+AFPR+N + + + T YPP S I H
Sbjct: 83 NYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHG 141
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
+ FS+ L G +S +++L +FV A + AF
Sbjct: 142 NTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIF 198
Query: 403 XXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
G A+T+L D+ + T FFD A GGD + YQ+LF F HP VY++ LP ++
Sbjct: 199 VPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMV 254
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 81.4 bits (192), Expect = 1e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +1
Query: 58 LILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 237
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 238 LAIFS 252
LAI+S
Sbjct: 61 LAIYS 65
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/56 (50%), Positives = 31/56 (55%)
Frame = +3
Query: 357 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFXT 524
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIF T
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 80.6 bits (190), Expect = 2e-14
Identities = 53/174 (30%), Positives = 73/174 (41%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
L DR L+ FF GG+ + + ++F GHPEVYILILP FG+
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGV 317
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 79.8 bits (188), Expect = 4e-14
Identities = 48/173 (27%), Positives = 74/173 (42%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
L+P +LG+ D+A+PR++ F + +G +YPPL+S + G
Sbjct: 98 LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGI 157
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
+ D + + IS+ S D++P++ +TA
Sbjct: 158 NSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPP 217
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
+L +R FF A GGD +L+QHLF GHPEVYI+ LP G I
Sbjct: 218 LILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAI 270
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 79.8 bits (188), Expect = 4e-14
Identities = 50/174 (28%), Positives = 75/174 (43%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
+ + DR L+T F+ GG +LY +L GHPEVYILILP FGI
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGI 292
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 79.4 bits (187), Expect = 5e-14
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 4/179 (2%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSN 210
N +PL++GA D+AFPR+N + ++ G G Y L+S
Sbjct: 96 NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSV 155
Query: 211 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 390
G D L L GI + + ++P+FV +T+
Sbjct: 156 QFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAII 215
Query: 391 XXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A+ +L+ DR +FF+ GG + YQHLF GHPEVYILILP GII
Sbjct: 216 IFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGII 274
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 79.4 bits (187), Expect = 5e-14
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Frame = +1
Query: 178 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 348
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 349 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHP 528
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF F GHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 529 EVYILILPGFGII 567
EVY+LI+P FG I
Sbjct: 403 EVYVLIIPTFGFI 415
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 78.6 bits (185), Expect = 9e-14
Identities = 48/173 (27%), Positives = 72/173 (41%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
L+P +L A D+ FPR++ + G +YPPL+ G
Sbjct: 108 LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGD 167
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
+ D + + IS+ S ++P+F A+ I A
Sbjct: 168 NADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPA 227
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A +L +R+ FF GGDP+L+QHLF F GHPEVYI+ LP G++
Sbjct: 228 VILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLV 280
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 78.2 bits (184), Expect = 1e-13
Identities = 48/173 (27%), Positives = 74/173 (42%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A +L +R + FF GGDP+L+QHLF F GHPEVYI+ LP G++
Sbjct: 287 VILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMV 339
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 75.8 bits (178), Expect = 7e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 445 NLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
N T+FFDPAGGGD IL+QHLF F GHPEVYILILPGFG+I
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMI 231
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 72.9 bits (171), Expect = 5e-12
Identities = 57/191 (29%), Positives = 81/191 (42%), Gaps = 16/191 (8%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NI 213
N +P+ +GA D+AFPR N + F + +G +G T Y LS+
Sbjct: 112 NYFLPIQIGAEDMAFPRFNMMSFWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGD 171
Query: 214 AHRGRSVDLAIFSLHLA--GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 387
A G + ++ + +A I+S S ++P+ A IT+
Sbjct: 172 AGPGMAYGQTLWGISIAIFCIASLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCI 231
Query: 388 XXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FXGHPEV 534
A +L DR TSFF P+G GG +L+QHLF F GHPEV
Sbjct: 232 ALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEV 291
Query: 535 YILILPGFGII 567
YI ILP GI+
Sbjct: 292 YIAILPAMGIV 302
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 72.9 bits (171), Expect = 5e-12
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 225
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 226 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 405
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 406 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFG 561
G +LL ++ S++ GG +++++LF + GHPEVY+L+LPG G
Sbjct: 231 EITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTG 281
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 72.5 bits (170), Expect = 6e-12
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 14/189 (7%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYP---PLSSNI 213
N L+PL++GA D+AFP++N + + G G T YP L+
Sbjct: 118 NFLIPLMIGADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLADLAQAA 177
Query: 214 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 393
G + + + G SS +F +LP+ + + ITA
Sbjct: 178 PGSGTAQTYWLLGVTFVGFSSMMGSINYMTTIINMRAPGMTFFRLPMTIWGLFITAILQA 237
Query: 394 XXXXXXAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FXGHPEVYI 540
+ + DR T FF P+G GG P+L+QHLF F HP VYI
Sbjct: 238 FALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQPLLWQHLFWFYSHPAVYI 297
Query: 541 LILPGFGII 567
++LP G++
Sbjct: 298 MLLPIMGMV 306
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 72.5 bits (170), Expect = 6e-12
Identities = 44/168 (26%), Positives = 70/168 (41%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
L+P +LGA D+ FPR++ + + + +G +YPPL++ G
Sbjct: 126 LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGL 183
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
D+ + L ++S + +PL+ V +
Sbjct: 184 GSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPP 243
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILP 552
+ +R + FFDP GGDP+L+QHLF GHPEVYI+ LP
Sbjct: 244 LIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLP 291
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 6e-12
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 196 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 375
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 376 TAFXXXXXXXXXAGAITILLTDR 444
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/51 (43%), Positives = 24/51 (47%)
Frame = +3
Query: 3 FFYSYTYYNWRXWKLXXXXXXXXXXXXXPTNK*YKXLTPTPLPYIINFKKN 155
FF+ TYYNW WKL P NK YK LT PL Y K+N
Sbjct: 19 FFHGNTYYNWWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 71.7 bits (168), Expect = 1e-11
Identities = 47/175 (26%), Positives = 72/175 (41%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGII 567
A+ +L DR L T FF GG+ +LY +LF GHPEVY ++LP FG I
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFI 317
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 68.1 bits (159), Expect = 1e-10
Identities = 45/174 (25%), Positives = 66/174 (37%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N +PL LG D+A PR+N G T Y PL+ +
Sbjct: 100 NYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQT 159
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G SV + L+ G+ S ++P+F ++ T+
Sbjct: 160 GVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQLLTL 217
Query: 403 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
A + + L S F+P GG P+LYQ F F HP VY+++LP GI
Sbjct: 218 GGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGI 271
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 66.1 bits (154), Expect = 5e-10
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 13/188 (6%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN--IA 216
N LVPL +GA D+AFPR+N + + G T+Y PL++ I
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIP 148
Query: 217 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 396
G + +L + + +P+F ++ +T +
Sbjct: 149 GEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLF 208
Query: 397 XXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FXGHPEVYIL 543
A+ IL +D L T++F D G +L+ HLF F GHPEVYI+
Sbjct: 209 AFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIV 268
Query: 544 ILPGFGII 567
P G++
Sbjct: 269 FFPALGVM 276
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 204
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 6e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 154 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 276
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 58.8 bits (136), Expect = 8e-08
Identities = 28/41 (68%), Positives = 29/41 (70%)
Frame = +3
Query: 444 KLKYIIF*SCWRRRPNFISTFILIFXTS*SLYFNFTRIWYN 566
K KYIIF S W F+STFILIF T SLYFNFT IWYN
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYN 47
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 57.6 bits (133), Expect = 2e-07
Identities = 35/78 (44%), Positives = 42/78 (53%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 222
N LVPL+LGAPD+AFPR+NN+ F + G + PL
Sbjct: 64 NWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISA 121
Query: 223 GRSVDLAIFSLHLAGISS 276
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 57.2 bits (132), Expect = 3e-07
Identities = 42/151 (27%), Positives = 49/151 (32%)
Frame = +3
Query: 3 FFYSYTYYNWRXWKLXXXXXXXXXXXXXPTNK*YKXLTPTPLPYIINFKKNCRKWCRNRM 182
F YS TYYN KL P NK +K L TPL Y N C K C + +
Sbjct: 51 FLYSNTYYNSGIRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSV 110
Query: 183 NSLPPTFI*YRT*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCM 362
NSLP Y T R +F T CM
Sbjct: 111 NSLPAPCCKYLTLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCM 170
Query: 363 SCRDYSXXXXXXTTCFSWSYYNIINRSKLKY 455
+YS + S+YNI K KY
Sbjct: 171 KSNNYSCTSTSFSPSIGSSHYNITYWPKPKY 201
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 56.0 bits (129), Expect = 6e-07
Identities = 30/70 (42%), Positives = 39/70 (55%)
Frame = +1
Query: 340 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FX 519
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 520 GHPEVYILIL 549
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/57 (49%), Positives = 33/57 (57%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 213
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 48.8 bits (111), Expect = 9e-05
Identities = 40/172 (23%), Positives = 63/172 (36%)
Frame = +1
Query: 49 LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 228
L+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 180 LIPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGS 235
Query: 229 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 408
+ + ++S S ++P+FV + A
Sbjct: 236 GIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPA 295
Query: 409 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYILILPGFGI 564
+ L+D + F+ G P+ Y F F HPEVY+ ILP F I
Sbjct: 296 TYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAI 346
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 360 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 512
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 47.6 bits (108), Expect = 2e-04
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 213
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TV 189
N VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 84 NWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 43 N*LVPLILGAPDIAFPRINNIXFXXXXXXXXXXXXXXIVENGAGTG*TV 189
N L+PL++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 81 NYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.031
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 223 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 402
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 403 XXXAGAITILLTDRNLNT 456
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 39.5 bits (88), Expect = 0.054
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1
Query: 514 FXGHPEVYILILPGFGII 567
F GHPEVYILILPGFG+I
Sbjct: 2 FFGHPEVYILILPGFGMI 19
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 36.3 bits (80), Expect = 0.50
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 514 FXGHPEVYILILPGFGII 567
F GHPEVY+LILP FGI+
Sbjct: 1 FFGHPEVYVLILPVFGIV 18
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.7 bits (76), Expect = 1.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 478 GGDPILYQHLF*FXGHPEVYILILPGF 558
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 34.7 bits (76), Expect = 1.5
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 372 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFXTS*SLYFNFT 551
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 552 RI 557
I
Sbjct: 154 SI 155
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 6.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 443 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 321
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 6.2
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -2
Query: 497 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 360
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 8.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 120 TPLPYIINFKKNCRKWCRN 176
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,230,826
Number of Sequences: 1657284
Number of extensions: 7388564
Number of successful extensions: 16551
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 15090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16319
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -