Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_N14
(647 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 24 0.94
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 22 3.8
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 22 3.8
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 22 3.8
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 22 3.8
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 22 3.8
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 21 6.6
DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory pro... 21 6.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 6.6
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 6.6
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 21 8.7
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 21 8.7
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 21 8.7
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein.
Length = 980
Score = 24.2 bits (50), Expect = 0.94
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +3
Query: 198 VVKQIDVPSFSGAFGILPKHVPTLAVLRP---GVVTILENDGKQNKIFVSSGTITVNDDS 368
++ +D+ F G+ G P + +R G LE DG + +SSG T D +
Sbjct: 855 MIWSVDMDDFRGSCG--SGKYPLINAMRQELEGYKVKLEYDGPY-ETSISSGQYTTKDPN 911
Query: 369 SVQVLAEEAH 398
V EE H
Sbjct: 912 EVTCDEEEGH 921
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 417 GQCSPEGEPLR 385
G+C+PEGE L+
Sbjct: 50 GKCTPEGEELK 60
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 417 GQCSPEGEPLR 385
G+C+PEGE L+
Sbjct: 51 GKCTPEGEELK 61
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 417 GQCSPEGEPLR 385
G+C+PEGE L+
Sbjct: 51 GKCTPEGEELK 61
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 417 GQCSPEGEPLR 385
G+C+PEGE L+
Sbjct: 51 GKCTPEGEELK 61
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 201 VKQIDVPSFSGAFGILPKHVPTL 269
V +PS S + G LPK +P L
Sbjct: 196 VSPASLPSISPSGGFLPKWLPPL 218
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 198 LVCHKRPYYPQRRSMPFRHLWEXLH 124
L +++PY Q++S P + W+ ++
Sbjct: 38 LYTYRQPYPRQKKSHPPQWTWQCIN 62
>DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory
protein 10 protein.
Length = 129
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 417 GQCSPEGEPLR 385
G CSP+GE L+
Sbjct: 54 GTCSPDGEELK 64
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 435 PPVQHYGQCSPEG 397
PP + YG C EG
Sbjct: 552 PPTKPYGTCRSEG 564
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 26 LSSFASSKQAHHH 64
+S +ASS+ HHH
Sbjct: 45 MSPYASSQHHHHH 57
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 417 GQCSPEGEPLR 385
G+CSP+G+ L+
Sbjct: 52 GKCSPDGQELK 62
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 63 MALAFRGVISNVARRLQVRN 122
++ + G++ NVA+ LQ+ N
Sbjct: 744 LSKSLEGLLENVAQYLQIEN 763
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 417 GQCSPEGEPLR 385
G+CSP+G+ L+
Sbjct: 52 GKCSPDGQELK 62
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,541
Number of Sequences: 336
Number of extensions: 2345
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -