Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_N11
         (589 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B479F Cluster: PREDICTED: similar to gag-pol po...    36   0.53 
UniRef50_UPI000065D329 Cluster: E3 ubiquitin-protein ligase Arka...    35   1.2  
UniRef50_Q4WSL7 Cluster: Carnitine acetyl transferase; n=19; Asc...    35   1.2  
UniRef50_Q96FW1-2 Cluster: Isoform 2 of Q96FW1 ; n=1; Homo sapie...    33   4.9  
UniRef50_A7H6W9 Cluster: ABC transporter related; n=2; Anaeromyx...    33   4.9  
UniRef50_Q96N68 Cluster: Uncharacterized protein C18orf15; n=1; ...    33   4.9  

>UniRef50_UPI00015B479F Cluster: PREDICTED: similar to gag-pol
            polyprotein; n=3; Nasonia vitripennis|Rep: PREDICTED:
            similar to gag-pol polyprotein - Nasonia vitripennis
          Length = 1557

 Score = 36.3 bits (80), Expect = 0.53
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +1

Query: 88   SQSFXIXVNGKQLTVTIARLKPAYITRXD 174
            +Q+F I  NG Q TVT+ RLKPA+I + D
Sbjct: 1434 NQTFNIDFNGTQKTVTLQRLKPAFILQED 1462


>UniRef50_UPI000065D329 Cluster: E3 ubiquitin-protein ligase Arkadia
           (EC 6.3.2.-) (RING finger protein 111).; n=1; Takifugu
           rubripes|Rep: E3 ubiquitin-protein ligase Arkadia (EC
           6.3.2.-) (RING finger protein 111). - Takifugu rubripes
          Length = 1008

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 21/41 (51%), Positives = 24/41 (58%)
 Frame = +1

Query: 223 QRPVQKTRSGRTVTFPDYYRP*LSVSAGEYCGIILPRLPEC 345
           QRP   + S RT T  D  RP LS +AGE  G  +PRLP C
Sbjct: 441 QRP---SGSNRTATEDDN-RPTLSAAAGENAGTAMPRLPSC 477


>UniRef50_Q4WSL7 Cluster: Carnitine acetyl transferase; n=19;
           Ascomycota|Rep: Carnitine acetyl transferase -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 825

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +1

Query: 337 PECGPARKNQVMRARANQEPTRGRVIAGDAGLLRRQSATKPRTD 468
           P    AR+ +++  R   +  RGR++ GD+GL+RR + T P TD
Sbjct: 731 PRTSRAREMEMVAERFQNDHRRGRLVRGDSGLVRRGTDT-PTTD 773


>UniRef50_Q96FW1-2 Cluster: Isoform 2 of Q96FW1 ; n=1; Homo
           sapiens|Rep: Isoform 2 of Q96FW1 - Homo sapiens (Human)
          Length = 315

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 216 RTSASSTKDEKRPYSHLPGLLSTVAIGLGGGVLWHHPATAT*VRTCAQESGDACA-RQSG 392
           RTS  ST+   RP     GL +TV+IGL     W H       R+C+ E G   A RQ G
Sbjct: 48  RTSTKSTRTSARP-----GLTATVSIGLSDSPTWRHCWMT--ARSCSGEKGGHWAPRQVG 100


>UniRef50_A7H6W9 Cluster: ABC transporter related; n=2;
           Anaeromyxobacter|Rep: ABC transporter related -
           Anaeromyxobacter sp. Fw109-5
          Length = 299

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = +1

Query: 289 LSVSAGEYCGIILPRLPECGPARKNQVMRARANQEPTRGRVIAGDAGLLRRQSATKPRTD 468
           L+V AGE   ++ P     G  +   +  A     PT GRV+ GD G+    SA +PR  
Sbjct: 22  LTVGAGEVVALLGPN----GSGKTTSLKAAAGLVRPTSGRVLVGDPGV----SAAEPRAR 73

Query: 469 RA 474
           RA
Sbjct: 74  RA 75


>UniRef50_Q96N68 Cluster: Uncharacterized protein C18orf15; n=1;
           Homo sapiens|Rep: Uncharacterized protein C18orf15 -
           Homo sapiens (Human)
          Length = 181

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +2

Query: 428 GCCAGSPPQSLVLIARFSLIIVISYIC*SFVLCLVNLLIICSVSCCRNI*LFLV 589
           G C    PQSL ++   + + V  ++C    +C+  L+ +C+ +C R    FL+
Sbjct: 114 GPCCPVHPQSLTVVCMCACMCVCVHVCACVYVCMCVLVCMCACACMRAHRYFLM 167


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,867,855
Number of Sequences: 1657284
Number of extensions: 9523386
Number of successful extensions: 29436
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29423
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)