Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_N11
         (589 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0334 - 3680612-3681266,3682253-3682374                           29   2.1  
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147...    29   2.1  
06_03_0237 + 18576317-18576412,18577273-18577778,18577906-185780...    29   2.7  
05_01_0214 - 1615519-1616775                                           29   3.6  
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085...    28   4.8  
11_01_0366 + 2793732-2793838,2793944-2794979                           28   6.3  

>10_01_0334 - 3680612-3681266,3682253-3682374
          Length = 258

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +2

Query: 236 KRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRARIR*CVRAPIRSQRAAALS 415
           +RR  A  S +RT   RS+RS RG+     C+           R   R   R  R A+ +
Sbjct: 126 RRRVRAQPSAARTLAGRSWRSPRGAGSGRGCYR----------RGGSREGRRGARGASAA 175

Query: 416 QVTPGCCAG 442
               GCC G
Sbjct: 176 AAVDGCCGG 184


>05_04_0102 +
           18013994-18014049,18014236-18014335,18014499-18014783,
           18014854-18015023,18015382-18015510,18016109-18016205,
           18016318-18016395,18016474-18016635,18016673-18016771
          Length = 391

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 311 TVASSCHGYLSADLRARIR*CVR 379
           +VA+SC+GYL ADL+A  R   R
Sbjct: 68  SVAASCNGYLGADLQALCREAAR 90


>06_03_0237 +
           18576317-18576412,18577273-18577778,18577906-18578024,
           18578409-18578763,18578803-18578866,18578967-18579231,
           18579354-18579529
          Length = 526

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 543 INKLTRHKTND*QIYEITIMREKRAISTRLCGGLP 439
           +NKL +HK     +  IT  +EK A  TR C G P
Sbjct: 352 MNKLVKHKR---MLEVITDRKEKEAAETRACSGKP 383


>05_01_0214 - 1615519-1616775
          Length = 418

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
 Frame = +3

Query: 120 TINCHHSSPKTCLYHAXRWQXXXQTEXQRGERRTSASSTKDEKR------PYSHLPG-LL 278
           T+N HH  P T  +H    +   +++      ++ A   K  +R       Y H+ G  +
Sbjct: 232 TVNLHHH-PGTGHHHHDAEEPLLKSDAGCDSTQSGAKDAKKARRNINVHSAYLHVLGDSI 290

Query: 279 STVAIGLGGGVLWHHP 326
            ++ + +GG ++W+ P
Sbjct: 291 QSIGVMIGGAIIWYKP 306


>04_04_0394 +
           24905501-24905673,24907824-24907868,24908412-24908513,
           24908700-24908799,24908963-24909247,24909318-24909487,
           24909846-24909974,24910332-24910428,24910541-24910618,
           24910694-24911017
          Length = 500

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 311 TVASSCHGYLSADLRARIR*CVR 379
           +VA+SC+GY+ ADL+A  R   R
Sbjct: 156 SVAASCNGYVGADLQALCREAAR 178


>11_01_0366 + 2793732-2793838,2793944-2794979
          Length = 380

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 209 RAKNISVQYKRR-EAAVQSPSRTTIDRSYRSRRGSTVASSCH 331
           R+KN++V   +  + A  +    T D+ + +  G TVA+ CH
Sbjct: 183 RSKNVTVLLDQTVDLAAAAAGANTDDKVFTTSAGETVAADCH 224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,856,782
Number of Sequences: 37544
Number of extensions: 288513
Number of successful extensions: 1015
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)