Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_N11
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK055900-1|BAB71040.1| 181|Homo sapiens protein ( Homo sapiens ... 33 0.75
BC043144-1|AAH43144.1| 1163|Homo sapiens regulating synaptic mem... 31 2.3
AB018294-1|BAA34471.2| 1200|Homo sapiens KIAA0751 protein protein. 31 2.3
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 29 9.2
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 29 9.2
M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 prot... 29 9.2
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 29 9.2
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 29 9.2
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 29 9.2
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 29 9.2
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 29 9.2
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 29 9.2
AF139897-1|AAD50078.1| 344|Homo sapiens BASS1 protein. 29 9.2
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 29 9.2
>AK055900-1|BAB71040.1| 181|Homo sapiens protein ( Homo sapiens
cDNA FLJ31338 fis, clone MAMGL1000184. ).
Length = 181
Score = 33.1 bits (72), Expect = 0.75
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 428 GCCAGSPPQSLVLIARFSLIIVISYIC*SFVLCLVNLLIICSVSCCRNI*LFLV 589
G C PQSL ++ + + V ++C +C+ L+ +C+ +C R FL+
Sbjct: 114 GPCCPVHPQSLTVVCMCACMCVCVHVCACVYVCMCVLVCMCACACMRAHRYFLM 167
>BC043144-1|AAH43144.1| 1163|Homo sapiens regulating synaptic membrane
exocytosis 2 protein.
Length = 1163
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 437 RSSPASPAITR--PRVGS*LARARIT*FLRAGPHSGSRGRMMPQYSPAET 294
RS+P SPA++R PR GS T P +G RGR +PQ P T
Sbjct: 879 RSAPPSPALSRSHPRTGSVQTSPSST------PVAGRRGRQLPQLPPKGT 922
>AB018294-1|BAA34471.2| 1200|Homo sapiens KIAA0751 protein protein.
Length = 1200
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 437 RSSPASPAITR--PRVGS*LARARIT*FLRAGPHSGSRGRMMPQYSPAET 294
RS+P SPA++R PR GS T P +G RGR +PQ P T
Sbjct: 916 RSAPPSPALSRSHPRTGSVQTSPSST------PVAGRRGRQLPQLPPKGT 959
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 954 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 1013
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 1014 RTPLRRRFS---RSPIRRKRS 1031
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 817 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 876
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 877 RTPLRRRFS---RSPIRRKRS 894
>M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 protein
gene, partial cds. ).
Length = 483
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 269 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 328
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 329 RTPLRRRFS---RSPIRRKRS 346
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 1921 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 1980
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 1981 RTPLRRRFS---RSPIRRKRS 1998
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 1961 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 2020
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 2021 RTPLRRRFS---RSPIRRKRS 2038
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 1961 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 2020
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 2021 RTPLRRRFS---RSPIRRKRS 2038
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 1961 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 2020
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 2021 RTPLRRRFS---RSPIRRKRS 2038
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 1961 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 2020
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 2021 RTPLRRRFS---RSPIRRKRS 2038
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 1642 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 1701
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 1702 RTPLRRRFS---RSPIRRKRS 1719
>AF139897-1|AAD50078.1| 344|Homo sapiens BASS1 protein.
Length = 344
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 23 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 82
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 83 RTPLRRRFS---RSPIRRKRS 100
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 161 SRXXMAXXKXNRXPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYL 340
SR + +R P+RR++ S + + ++PSR RS RR +++
Sbjct: 1967 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRS 2026
Query: 341 SADLRARIR*CVRAPIRSQRA 403
LR R R+PIR +R+
Sbjct: 2027 RTPLRRRFS---RSPIRRKRS 2044
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,648,466
Number of Sequences: 237096
Number of extensions: 1407367
Number of successful extensions: 8406
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8393
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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