Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_N11
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   3.9  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    22   5.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   6.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.0  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 149 FRRAMVTVNCLPLTXMXNDC 90
           FR  +VTV CL L     DC
Sbjct: 2   FRATIVTVACLLLAASPIDC 21


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 292 IATVDSSPGR*LYGRFSSFVLDADVLRSPR 203
           +ATV S     L+  F  ++  A  +R PR
Sbjct: 14  LATVSSQDYSQLFAGFGPYIRQAVAMRDPR 43


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 476 NARSVRGFVADCRRSSPASPAITRPRVGS 390
           +A+    F   CR  SP++P+ITR  + S
Sbjct: 320 SAKYRNAFKETCR-CSPSNPSITRTGLSS 347


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 497 SYIC*SFVLCLVNLLIICSVSCCR 568
           S++    +LC  ++L +C++S  R
Sbjct: 113 SWVSLDILLCTASILSLCAISIDR 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,563
Number of Sequences: 438
Number of extensions: 2748
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)