Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_N10
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.29 
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    24   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   3.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.8  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 402 CGGDYADFQYLKDIIQQKIIDE 467
           C GD  D   ++DI+ Q ++DE
Sbjct: 108 CPGDLYDSDIIQDIVPQNVLDE 129


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 210 PSRHGVQDFTAHSASPITTTTTVIGVKFDKGC 305
           PS+HG+ D TA    P   T  +  + +++ C
Sbjct: 267 PSKHGLNDATAAPGEPGPYTVNLGSLGYNEIC 298


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 312  AGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKD 440
            AG+   + G LA +  C  V+K    ++    G    + YL+D
Sbjct: 2092 AGEETRARGFLAYYEICTNVIKKGWKVVRDRRGRIGPYAYLRD 2134


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
 Frame = +1

Query: 163 RLEHFIIFLEMLPQLLHPGTVYRILQLTQRAPSRPLQRSSELSLTR--DVLSPVTHW--- 327
           +L   +I   ++  L+H  +  R+   T+R   RPL+ +  +S+T+  DV S V  +   
Sbjct: 8   KLRTVLIVTLLVVLLVHISSSERV---TRRRLRRPLKTTQSVSVTKDQDVSSSVNRFRLR 64

Query: 328 ARTGH 342
           +R GH
Sbjct: 65  SRPGH 69


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 615 LRERVHHPEYRRPRSCSREDPSC 547
           +R+R H PE   PR     +PSC
Sbjct: 19  VRKRPHSPEPYPPRCPPIYEPSC 41


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = +3

Query: 564 WNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYMATPLLRDAVD 710
           W+   +   Q+G      +D L T Y   +I N L  Y A  L     D
Sbjct: 113 WDKVEIVRSQEGRFEEAVIDYLFTVYLLPIIINPLVLYEARKLANVVTD 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,448
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)