Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_N08
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1070 + 33872845-33873726 179 2e-45
09_04_0126 + 14874739-14875581 174 8e-44
08_02_0807 + 21411799-21412665 155 4e-38
04_04_1644 + 35015849-35016838 112 4e-25
07_01_0499 - 3738959-3740068 94 1e-19
10_01_0149 + 1745355-1746230 87 2e-17
06_01_0276 + 2035763-2036770 81 1e-15
10_08_0041 - 14374684-14377339,14377371-14378233 73 4e-13
10_08_0032 - 14288522-14290465 70 2e-12
06_03_0342 + 19737951-19738772 69 3e-12
10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020 67 1e-11
10_01_0124 - 1504521-1505303 67 1e-11
10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657 61 9e-10
06_03_0183 + 17642639-17643428,17644507-17644949 50 2e-06
07_03_0102 - 13418882-13419082,13419291-13419433,13419451-134196... 30 2.5
10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175 29 3.3
05_06_0118 + 25735966-25737601,25737698-25738488 29 3.3
08_02_0757 + 20840885-20841281,20842937-20843025,20843132-208432... 28 7.5
08_01_0451 + 3979323-3979566,3979649-3980012,3980112-3980330,398... 28 7.5
04_04_0409 + 24992944-24993421,24993920-24994000,24994400-249946... 28 7.5
06_01_0386 - 2767806-2767955,2768150-2768239,2768317-2768373,276... 28 9.9
06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-27... 28 9.9
>02_05_1070 + 33872845-33873726
Length = 293
Score = 179 bits (436), Expect = 2e-45
Identities = 85/156 (54%), Positives = 112/156 (71%), Gaps = 6/156 (3%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 530
I++VW NL EEF +IR VV ++ +VAMDTEFPG+V RP+G FRS ADY Y L+ NVD+
Sbjct: 30 IREVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDM 89
Query: 531 LRIIQLGLTFMDENGKTP---PG--YTTWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRK 692
L +IQLGLTF G+ P PG WQFNF+ F+ D++A DSI+LL+ SG+ FR+
Sbjct: 90 LHLIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSGIDFRR 149
Query: 693 HEEDGIXPLEFAELLMSSGLVLIDNIKWLXFHSGYD 800
+ E G+ FAELLMSSG+VL D++ W+ FH+GYD
Sbjct: 150 NSERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYD 185
>09_04_0126 + 14874739-14875581
Length = 280
Score = 174 bits (423), Expect = 8e-44
Identities = 81/156 (51%), Positives = 109/156 (69%), Gaps = 6/156 (3%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 530
I++VW NL EF +IR++V + +VAMDTEFPGVV RP+G F+S AD+ Y L+ NVD+
Sbjct: 14 IREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATLKANVDM 73
Query: 531 LRIIQLGLTFMDENGKTPP-----GYTTWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRK 692
L++IQLGLTF +E+G P WQFNF+ F+ + D+ A DSIDLL+ SG+ F +
Sbjct: 74 LKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRSGIDFTR 133
Query: 693 HEEDGIXPLEFAELLMSSGLVLIDNIKWLXFHSGYD 800
H DG FAELLMSSG+V+ ++W+ FHSGYD
Sbjct: 134 HSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYD 169
>08_02_0807 + 21411799-21412665
Length = 288
Score = 155 bits (376), Expect = 4e-38
Identities = 75/156 (48%), Positives = 102/156 (65%), Gaps = 6/156 (3%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDL 530
I++VW NL E IR V +Y +VAMDTEFPG+V RP+G FR+T ++ Y L NV++
Sbjct: 18 IREVWAGNLEAEIAAIRDEVDRYPYVAMDTEFPGIVCRPVGNFRTTDEFNYANLEANVNM 77
Query: 531 LRIIQLGLTFMDENGKTPPGYT-----TWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRK 692
L++IQLGLT DE G P T WQFNF+ F+ + D DSI +L+ G+ F +
Sbjct: 78 LKLIQLGLTLSDEGGDLPRRGTGGRRCIWQFNFRGFDPRTDPSNADSIQMLRTCGIDFDR 137
Query: 693 HEEDGIXPLEFAELLMSSGLVLIDNIKWLXFHSGYD 800
+G P+ FAELLMSSG+VL +++W+ FHSGYD
Sbjct: 138 FAAEGADPIRFAELLMSSGVVLNADVQWITFHSGYD 173
>04_04_1644 + 35015849-35016838
Length = 329
Score = 112 bits (269), Expect = 4e-25
Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIGE-FRSTADYQYQLLRCNVD 527
I+ VW HN+ EEF+IIR + + +V+MDTEFPGV+ RP TA +Y LLR NVD
Sbjct: 56 IRRVWAHNVEEEFRIIRNAIDHFPYVSMDTEFPGVIHRPTKHPALLTAGDRYDLLRRNVD 115
Query: 528 LLRIIQLGLTFMDENGKTPPGYTTWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRKHEED 704
L +IQ+G+T P ++ N F+ + +A +S+ LL G+ H
Sbjct: 116 ALHLIQVGITLAASPTAAPA--LAFEINLSDFDQRVHRHAAESVQLLAEHGVDLAAHRRH 173
Query: 705 GIXPLEFAELLMSSGLVLIDN-IKWLXFHSGYD 800
G+ A LLMSSGLV +KW+ FHS YD
Sbjct: 174 GVRASALAPLLMSSGLVCSHGAVKWVTFHSAYD 206
>07_01_0499 - 3738959-3740068
Length = 369
Score = 93.9 bits (223), Expect = 1e-19
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 8/137 (5%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIG-EFRSTADYQYQLLRCNVD 527
++ VW HNL EE +I + + A+DTEFPG V RP + T +Y LL+ NVD
Sbjct: 94 VRSVWAHNLDEEANLIESLFPSFRLAAVDTEFPGTVHRPSAPAYTLTRKQKYALLKKNVD 153
Query: 528 LLRIIQLGLTFMDENGKTPPGYT------TWQFNFK-FNLQEDMYAQDSIDLLQNSGLQF 686
L ++QLGLT D G+ P T W+FNF+ F+L+ +A +SI LL++ G+ F
Sbjct: 154 ELHLVQLGLTLFDAGGRLPDLGTGGAARYVWEFNFREFDLRRHAHAPESIALLRSKGVDF 213
Query: 687 RKHEEDGIXPLEFAELL 737
+ G+ F L
Sbjct: 214 DRTRRGGVDAAAFGPRL 230
>10_01_0149 + 1745355-1746230
Length = 291
Score = 87.0 bits (206), Expect = 2e-17
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Frame = +3
Query: 372 NLHEEFQIIRQVVQKYHWVAMDTEFPGVV-ARPIGEFRSTADYQYQLLRCNVDLLRIIQL 548
NLH E +IR ++ + +VA+DT+FPGVV P G TAD +Y +R N D L ++QL
Sbjct: 40 NLHREMSLIRSLMPTFPFVAVDTQFPGVVHPHPRGA-GVTADDRYAAVRANADELCLLQL 98
Query: 549 GLTFMDENGKTPPGYT----TWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIX 713
G+T +G+ P W F+F F+ + +A +S+ L+ G F G+
Sbjct: 99 GITLSAADGRLPVDGALVEFMWDFDFAGFDARYHRHAPESVQFLRAQGFDFEAARLAGVP 158
Query: 714 PLEFAELLMSSGLVLIDNIKWLXFHSGYD 800
L FA L +SG++ + + W+ F YD
Sbjct: 159 ALAFAAELAASGILGLRGVTWVAFGGMYD 187
>06_01_0276 + 2035763-2036770
Length = 335
Score = 81.0 bits (191), Expect = 1e-15
Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGV---VARPIGEFRSTADYQYQLLRCN 521
++DVW NL EE + I ++ Y V+MDTEFPG VA P T Y +++ N
Sbjct: 72 VRDVWAANLEEELRSIGALLPTYPVVSMDTEFPGTVHDVATP--RHLRTPRESYAVVKRN 129
Query: 522 VDLLRIIQLGLTFMDENGKTPPGYTTWQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRKHE 698
VD L ++QLGL G+ P WQFNF F+ + D ++ S+ +L G+ F
Sbjct: 130 VDELHLLQLGLALSGPAGRCP---VAWQFNFAGFDARRDPHSGSSVAMLAAHGVDFTALR 186
Query: 699 EDGIXPLEFAELLMSSGLVLIDNIKWLXFHSGYD 800
GI +FA S L + W F YD
Sbjct: 187 RHGIDHGDFARAFGRSKLA-CGRLTWAAFSGSYD 219
>10_08_0041 - 14374684-14377339,14377371-14378233
Length = 1172
Score = 72.5 bits (170), Expect = 4e-13
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYH---WVAMDTEFPGVVARPIGEFRSTADYQYQLLRCN 521
++ VW N E+F+++ + + + H ++A+D EF A + T+ YQ +R
Sbjct: 648 VQSVWRENCMEQFKLVLEALHQPHRHLYIAVDMEFAADAATNVSHRPVTSISCYQHMRRY 707
Query: 522 VDLLRIIQLGLTF--MDENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKH 695
V+ I Q+GLTF + E + P + NF FN+ Y SID L + G +H
Sbjct: 708 VNGGGIFQMGLTFAFVGEGEQAPSPLIALEINFDFNVNSPKYHGKSIDFLSSQGHDLTQH 767
Query: 696 EEDGIXPLEFAELLMSSGLVLID-NIKWLXFHSGYD 800
+ G+ P EF + L D ++ W+ FH YD
Sbjct: 768 SKRGVAP-EFVYEGLLRHLPFGDGSVTWVAFHGDYD 802
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 708 IXPLEFAELLMSSGLVLIDNIKWLXFHSGY 797
+ P +FA+ + S G + NI W+ FH +
Sbjct: 1025 VHPQQFAKFMASCGALGDPNISWVTFHGAH 1054
>10_08_0032 - 14288522-14290465
Length = 647
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVV---QKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCN 521
+K VW N E+F+++ + +++ ++A+D EF I T+ Y LR
Sbjct: 158 VKSVWRENYREQFKLVVDALHQPRRHLYIAVDMEFAADATTNIRRRPVTSTGCYHHLREF 217
Query: 522 VDLLRIIQLGLTFMDENG------KTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQ 683
V+ I+Q+GL F+ G + P T + NFK N++ Y + SI L G
Sbjct: 218 VNRGDIVQMGLAFVFVGGGEQSSSSSSPPPITLEINFKINIKARKYNKKSIAFLSRQGHD 277
Query: 684 FRKHEEDGIXPLEFAELLMSSGLVLID--NIKWLXFHSGYD 800
R+H G+ P F E L+ L D ++ WL +HS YD
Sbjct: 278 LREHRRRGVSPRRFYEGLLRH-LPFGDGRSVTWLAYHSDYD 317
>06_03_0342 + 19737951-19738772
Length = 273
Score = 69.3 bits (162), Expect = 3e-12
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVV---ARPIGEFRS----TADYQYQL 509
++ VW N E I+R V + A++ ++PG V A G+ R TA+ +YQ+
Sbjct: 5 VRSVWADNFAAESAILRAVAPCAVYAAINVQYPGCVVSAAGGAGDHRCYYDLTAEERYQV 64
Query: 510 LRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNF-KFNL--QEDMYAQDSIDLLQNSGL 680
+R N D L+ +QLGL +G G W+FN +F+L DM S+D L++ G+
Sbjct: 65 VRANADELKPLQLGLAVRTADG----GRFAWEFNLNEFDLAADGDMCEPGSVDYLRHRGM 120
Query: 681 QFRKHEEDGIXPLEFAELLMSSGLVLIDNIKWLXFHSGY 797
F G+ LL SSGL L W F Y
Sbjct: 121 DFNALPWSGVGAASLGRLLWSSGL-LAARPSWATFAGAY 158
>10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020
Length = 722
Score = 67.3 bits (157), Expect = 1e-11
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYH---WVAMDTEFPGVVARPIGEFRSTADYQYQLLRCN 521
++ VW N E+F+++ + + + H ++A+D EF A + T+ YQ +R
Sbjct: 329 VQSVWQENCMEQFKLVLEALHQPHRNLYIAVDMEFTADAATNMSHRPVTSTSCYQHVRRY 388
Query: 522 VDLLRIIQLGLTFM---DENGKTPPGYT-TWQFNFKFNLQEDMYAQDSIDLLQNSGLQFR 689
V+ I+Q+GLTF D G+ P + NF FN+ Y +SI L + G
Sbjct: 389 VNGGDIVQMGLTFAFVGDVEGEQAPSPPIALEINFDFNVNSPKYHGESIHFLSSQGHDLT 448
Query: 690 KHEEDGIXPLEFAELLMSSGLVLID-NIKWLXFHSGYD 800
+H + G+ P EF + L D ++ W+ +H YD
Sbjct: 449 QHSKRGVTP-EFVYEGLLRHLPFGDGSVTWVAYHGDYD 485
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 708 IXPLEFAELLMSSGLVLIDNIKWLXFHSGY 797
+ P +FA+ + S G + NI W+ FH +
Sbjct: 610 VHPQQFAKFMASCGALGDPNISWVTFHGAH 639
>10_01_0124 - 1504521-1505303
Length = 260
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Frame = +3
Query: 372 NLHEEFQIIRQVVQKYHWVAMDTEFPGVVARP-IGEFRSTADYQYQLLRCNVDLLRIIQL 548
NL E +I +++ +Y +V +D EF GVV P R T D Y L+ NVD + +Q+
Sbjct: 5 NLDSEMGLIGEMMVQYPYVTIDVEFAGVVHHPPYTGSRPTPDEIYAALKSNVDEVPAVQI 64
Query: 549 GLTFMDENGKTPPGYTT-------WQFNFK-FNLQEDMYAQDSIDLLQNSGLQFRKHEED 704
G+T D G P ++ W+ F F+ D + DS++ L+N G+ F +
Sbjct: 65 GITLSDAEGNLPTRSSSSPEQEIAWEVVFSDFDAGRDPHVVDSVEFLKNQGIDFDLARQI 124
Query: 705 GIXPLEFAELLMS 743
G+ F E L++
Sbjct: 125 GVTSTAFGEKLLA 137
>10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657
Length = 1032
Score = 61.3 bits (142), Expect = 9e-10
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVV---QKYHWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCN 521
+K VW N E+F+++ + +++ ++A+D EF I T+ Y LR
Sbjct: 553 VKSVWRENYREQFKLVVDALNQPRRHLYIAVDMEFAADATTNIRRRPVTSTGCYHHLREF 612
Query: 522 VDLLRIIQLGLTFM------DENGKTPPGYTTWQFNFKFNLQEDMYAQDSIDLLQNSGLQ 683
V+ I+Q+GLTF+ + + P T + NFK N++ Y + SI L G
Sbjct: 613 VNRGDIVQMGLTFVFVGDGEQSSSSSSPPPITLEINFKINIKARKYNKKSIAFLSRQGHD 672
Query: 684 FRKHEEDGIXPLEFAELLMSSGLVLIDNIKWLXFHSGYD 800
R+H G+ P + G ++ WL +H YD
Sbjct: 673 LREHRRRGVSPRR-----VYDG----RSVTWLAYHGDYD 702
>06_03_0183 + 17642639-17643428,17644507-17644949
Length = 410
Score = 50.0 bits (114), Expect = 2e-06
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Frame = +3
Query: 351 IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIG-----EFRS-TADYQYQLL 512
I VW+ N E + V + VA+ ++PG G ++ S TA+ +Y ++
Sbjct: 17 IHSVWHDNFDAESAQLLAVAPRAVHVAVSVQYPGCAVAQAGTSGRKKYGSLTAEKRYDMV 76
Query: 513 RCNVDLLRIIQLGLTFM--DENGKTPPGYTTWQFN---FKFNLQEDMYAQDSIDLLQNSG 677
+ N+D L IQ+GL D++G + ++FN F N D+ SI L+ G
Sbjct: 77 KANIDELHPIQVGLAIRANDDDGDSGE-LVVFEFNLRGFDINNPADLRDPASIAHLRGRG 135
Query: 678 LQFRKHEEDGIXPLEFAELLMSSGLV 755
+ F + G+ P LL+ SGL+
Sbjct: 136 VDFGRLPCAGVEPHRLRLLLLGSGLL 161
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 447 PGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENG 575
PG RP + TA+ +Y +L+ NVD LR IQ+GL +G
Sbjct: 297 PGGEPRPFEQL--TAEQRYGVLKANVDALRAIQVGLAIRTGDG 337
>07_03_0102 -
13418882-13419082,13419291-13419433,13419451-13419647,
13419811-13420395,13420712-13420908
Length = 440
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 775 HFMLSMSTRPEDIRSSANSNGXIPSSSCFLNCRPEFCNRSIESCAY 638
H +L + T + +S +G SSSC L + C RS ++ Y
Sbjct: 27 HSVLLVRTEKSVLATSVQQHGKFLSSSCMLGHGEQICGRSKDNITY 72
>10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175
Length = 294
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 285 KRYKMPSASFGSIS--LPGGSDCGIKDVWNHNLHEEF 389
K Y +S+ +I+ LPG +D +K+ WN L + F
Sbjct: 70 KMYSKKGSSWSAIAAQLPGRTDLAVKNYWNSTLKKRF 106
>05_06_0118 + 25735966-25737601,25737698-25738488
Length = 808
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = -1
Query: 415 FWTTCLIIWNSSCKL*FQTSFIPQSLPPGSDMEPKLADGILYRLSVSK----REELSVFF 248
++ TC IIW+ S Q +P P +DM P DG+LY +S + E VFF
Sbjct: 579 YYLTC-IIWSCSS----QGQPLPDPPLPVNDMPPVSLDGVLYWMSEPRLGQSYERAIVFF 633
Query: 247 D--AVVFDL 227
+ A +FD+
Sbjct: 634 NIAAKIFDV 642
>08_02_0757 +
20840885-20841281,20842937-20843025,20843132-20843257,
20843617-20844333,20844420-20844630,20844739-20845238,
20845998-20846023,20846393-20846531,20846579-20846660,
20846990-20847153
Length = 816
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 219 TQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISL 329
T+ S + ++K + ETD + +PSA+FGS SL
Sbjct: 346 TKGASSSDGAQKRKRDAFSETDPQQCVPSAAFGSDSL 382
>08_01_0451 +
3979323-3979566,3979649-3980012,3980112-3980330,
3980713-3980872,3981680-3981817,3982161-3982448
Length = 470
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 399 RQVVQKYHWVAMDTEFPGVVARPIGEFRSTADYQYQ 506
+ +V++Y + + TE P +VA I + TADY Y+
Sbjct: 414 KDIVKEY--LTLPTEQPKIVAETIVDLARTADYMYK 447
>04_04_0409 +
24992944-24993421,24993920-24994000,24994400-24994622,
24994709-24994850,24995166-24995555
Length = 437
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 340 LPPGSDMEPKLADGILYRLSVSKREELSVFFDAVVFDLFCVF*TN*APVLGLLKHPLQV 164
+ PGS L++ L + + R+ L + + FD +C N P+L ++P QV
Sbjct: 281 IAPGSPSSTLLSEQKLRGVIENARQILKIVEEFGTFDKYCWSFVNNKPILSRFRYPRQV 339
>06_01_0386 -
2767806-2767955,2768150-2768239,2768317-2768373,
2768477-2768533,2768610-2769389
Length = 377
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 346 QSLPPGSDMEPKLADGILYRLSVSKR 269
+ LPPG+D E LA+ +LY S+ +R
Sbjct: 7 EQLPPGADRERLLAEEVLYLHSLWRR 32
>06_01_0027 -
271199-271424,271628-272095,272721-273018,273133-273343,
273427-274124,274921-274969,276059-276112,276244-276275,
276319-276484,276563-276628,276717-276812,276868-276957,
277302-277398,277496-277575,277709-277753,278006-278134,
278593-278722,278888-279222,279918-280053,280149-280328,
280422-280679,280752-281137
Length = 1409
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 588 GYTTWQFNFKFNLQEDMYAQDSIDLLQNS 674
G+ W K L+E YA++S+ L++NS
Sbjct: 330 GFQIWIEKLKVWLKEQTYAENSLSLIENS 358
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,170,401
Number of Sequences: 37544
Number of extensions: 404729
Number of successful extensions: 1094
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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