Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_N07
         (686 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7S1B4 Cluster: Predicted protein; n=1; Neurospora cras...    35   2.1  
UniRef50_O96253 Cluster: Putative uncharacterized protein PFB080...    34   3.7  
UniRef50_UPI0000498519 Cluster: hypothetical protein 62.t00011; ...    33   8.6  
UniRef50_A4ANZ7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q7S1B4 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 252

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +1

Query: 10  WSFRXPRALEVTAPDLIAAVPVTRAXXLDTTNTGPVSTGTPRP-TLVISLEXXXXXXXXX 186
           WS R   A E T      A+PVT +   D  + GPVS  T RP T ++ ++         
Sbjct: 19  WSHRHAPAPETTGKS--EAIPVTASDPWDMDDLGPVSFRTERPETAILDIDTLEASTTTL 76

Query: 187 LGWSREVLTXXXXWKL*LKSIEI 255
            G     +T      + ++S+ I
Sbjct: 77  TGMGSTTMTMTTTAPVQVESVII 99


>UniRef50_O96253 Cluster: Putative uncharacterized protein PFB0800c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0800c - Plasmodium falciparum
           (isolate 3D7)
          Length = 1817

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = -1

Query: 431 KLYIENHKCQLIKMIKSLLDCLSYLTSKSLCLKYNNH*SISTYYGVF 291
           K++I N+   LIK  KS  D + YLT+K+  L Y N   ++ YY ++
Sbjct: 473 KIFINNYD-MLIKHYKSTADHILYLTNKNENLNYLNTILLNNYYSLY 518


>UniRef50_UPI0000498519 Cluster: hypothetical protein 62.t00011;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 62.t00011 - Entamoeba histolytica HM-1:IMSS
          Length = 559

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 574 FRIKSVQFPKIFDIELICVNIWY 642
           + +K VQ PK+FD   +C N WY
Sbjct: 198 YLVKVVQIPKVFDRVTVCFNYWY 220


>UniRef50_A4ANZ7 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteriales bacterium HTCC2170|Rep: Putative
           uncharacterized protein - Flavobacteriales bacterium
           HTCC2170
          Length = 136

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +1

Query: 538 DIEDD-PIFPMLPFRIKSVQFPKIFDIE 618
           D+EDD P F  +P +I+SV+ P+ FD+E
Sbjct: 18  DLEDDGPNFHFVPLQIESVEMPESFDLE 45


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,723,569
Number of Sequences: 1657284
Number of extensions: 10880782
Number of successful extensions: 26987
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26969
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)