Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_N04
         (641 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D66904-1|BAA11029.1|  360|Homo sapiens suppressor for yeast muta...    32   2.0  
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            31   2.6  
U78550-1|AAC51342.1|  328|Homo sapiens mucin MUC5B protein.            30   8.0  

>D66904-1|BAA11029.1|  360|Homo sapiens suppressor for yeast mutant
           protein.
          Length = 360

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 222 SAAPVGSVVPNLVAPCGTPCIYPGQSIAP 308
           S++  G    +  +PC TPC  PG S+AP
Sbjct: 148 SSSASGWATASSTSPCSTPCSMPGTSVAP 176


>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
 Frame = -2

Query: 307  GAIDCPGYIQGVPHGATRFGTTDPTGAADIWASCDPATAIDGAPYCKYST-------GTT 149
            G+   P  I G  H AT   TT  T A    A+   +T   G P    +T       G+T
Sbjct: 1291 GSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGST 1350

Query: 148  SRPPCTNTLENEAPVTTLIAETP 80
            + P  T       PV T  A TP
Sbjct: 1351 TNPSSTPGTRPIPPVLTTTATTP 1373



 Score = 31.1 bits (67), Expect = 3.5
 Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
 Frame = -2

Query: 307  GAIDCPGYIQGVPHGATRFGTTDPTGAADIWASCDPATAIDGAPYCKYST-------GTT 149
            G+   P  I G  H AT   TT  T A    A+   +T   G P    +T       G+T
Sbjct: 1989 GSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGST 2048

Query: 148  SRPPCTNTLENEAPVTTLIAETP 80
            + P  T       PV T  A TP
Sbjct: 2049 TNPSSTPGTTPIPPVLTTTATTP 2071


>U78550-1|AAC51342.1|  328|Homo sapiens mucin MUC5B protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
 Frame = -2

Query: 310 AGAIDCPGYIQGVPHGATRFGTTDPTGAADIWASCDPATAIDGAPYCKYST-------GT 152
           +G+   P  I G  H  T   TT  T A    A+   +T   G P    +T       G+
Sbjct: 207 SGSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTPPSLITTATTITATGS 266

Query: 151 TSRPPCTNTLENEAPVTTLIAETP 80
           T+ P  T       PV T  A TP
Sbjct: 267 TTNPSSTPGTTPIPPVLTTTATTP 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,674,034
Number of Sequences: 237096
Number of extensions: 1711565
Number of successful extensions: 4184
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4184
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)