Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M24
         (473 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2; ...    34   1.4  
UniRef50_Q73R85 Cluster: Surface antigen, putative; n=1; Trepone...    33   4.3  
UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;...    33   4.3  
UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1; ...    32   5.6  
UniRef50_UPI000150A05F Cluster: NLI interacting factor-like phos...    32   7.4  
UniRef50_Q6MG59 Cluster: Protein G6b precursor; n=23; Eutheria|R...    32   7.4  
UniRef50_UPI0000E497DB Cluster: PREDICTED: similar to egg bindin...    31   9.8  
UniRef50_Q2U832 Cluster: Predicted protein; n=7; Trichocomaceae|...    31   9.8  
UniRef50_A5E7L8 Cluster: Predicted protein; n=1; Lodderomyces el...    31   9.8  

>UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 353

 Score = 34.3 bits (75), Expect = 1.4
 Identities = 22/54 (40%), Positives = 28/54 (51%)
 Frame = +3

Query: 207 DGGCGGRNISLYLVERKEGSPTARSSRRESAKIVAEHSAAEK*FCSQNNTYVYT 368
           D GCG  ++SLYL ER   S     S   + KI  +  AAE+ F   NN  V+T
Sbjct: 125 DLGCGWGSLSLYLAERYPNSRIYALSNSRTQKIYIDSIAAERGF---NNLEVHT 175


>UniRef50_Q73R85 Cluster: Surface antigen, putative; n=1; Treponema
           denticola|Rep: Surface antigen, putative - Treponema
           denticola
          Length = 618

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 145 SSQNGNLFVATKNDNDCDGTLCTVQIENETK 53
           S +NG  +V  + +N  D  +CT+Q  N+ K
Sbjct: 571 SEENGRFYVVDRRENSTDNNICTIQQVNDAK 601


>UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 774

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 342 NKIIFPLHYVLLLSSPIRALSSVRWGNLPFFPPS-KEKCSDRHNRH 208
           NK + P  Y  + SSP+   S+   GNL F   S  ++  D HN H
Sbjct: 689 NKSVLPSIYSSMQSSPLSTSSTTSKGNLSFLVSSNNDEDDDHHNHH 734


>UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1;
           Pelodictyon luteolum DSM 273|Rep: Putative
           uncharacterized protein - Pelodictyon luteolum (strain
           DSM 273) (Chlorobium luteolum (strain DSM273))
          Length = 427

 Score = 32.3 bits (70), Expect = 5.6
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -3

Query: 354 YYFANKIIFPLHYVLLLSSPIRALSSVRWGNLPF 253
           Y FANK +F ++Y+L+ S  I  L SV +G + F
Sbjct: 74  YPFANKPVFWVYYILIFSIGIGILHSVAYGAIAF 107


>UniRef50_UPI000150A05F Cluster: NLI interacting factor-like
           phosphatase family protein; n=1; Tetrahymena thermophila
           SB210|Rep: NLI interacting factor-like phosphatase
           family protein - Tetrahymena thermophila SB210
          Length = 926

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 136 NGNLFVATKNDNDCDGTLCTVQIENETKLACRFTIHCHS 20
           N N    ++N   C+ TLCT+Q   + ++ C F+I  H+
Sbjct: 721 NKNPSPFSRNVESCNETLCTIQCTPQEQIQCLFSIRPHA 759


>UniRef50_Q6MG59 Cluster: Protein G6b precursor; n=23; Eutheria|Rep:
           Protein G6b precursor - Rattus norvegicus (Rat)
          Length = 232

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 17/66 (25%), Positives = 25/66 (37%)
 Frame = +1

Query: 79  CKVFHHNHCRFSLPQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKER 258
           CK    N  R  +  +        + ++ GS  S      LG   V+ +G     WW+  
Sbjct: 106 CKGRQENESRTVIQVLGDKAGCRPSGSTHGSEYSKVLIPLLGFGLVLGLGALGLVWWRRS 165

Query: 259 KVPPPH 276
            VPP H
Sbjct: 166 CVPPSH 171


>UniRef50_UPI0000E497DB Cluster: PREDICTED: similar to egg bindin
           receptor 1 precursor; n=3; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to egg bindin
           receptor 1 precursor - Strongylocentrotus purpuratus
          Length = 1228

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
 Frame = +1

Query: 67  QSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVAVG--TFLF 240
           Q + C  + H+   F+LPQ NCH   +  S     +   +N         V+ G  +   
Sbjct: 18  QILVCDSYAHDTSNFNLPQHNCHRQWSSGSLGANGSPEISNCPDSTVEVTVSAGVTSLNV 77

Query: 241 TWWKERKVPPPHGA 282
           TW     V P  GA
Sbjct: 78  TWTIPTAVDPNGGA 91


>UniRef50_Q2U832 Cluster: Predicted protein; n=7;
           Trichocomaceae|Rep: Predicted protein - Aspergillus
           oryzae
          Length = 398

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 145 TKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKERK 261
           ++ S+S GSN  A     +G +A VA+ TFL  W+  RK
Sbjct: 23  SQGSSSGGSNVGAIAGGVVGGVAAVALITFLVWWFFVRK 61


>UniRef50_A5E7L8 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 344

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +1

Query: 109 FSLPQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKERKVPPPHGAQG 288
           F + Q     + +K++N QGS+ S  N+  LGA AV  VG++L +    +  P  + + G
Sbjct: 99  FVMNQAMSSMSGSKHNNYQGSSNSGLNSAGLGA-AVSMVGSYLASHSSGQNKPAGNNSSG 157


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,663,191
Number of Sequences: 1657284
Number of extensions: 7707510
Number of successful extensions: 20336
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20330
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)