BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M24
(473 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 23 1.1
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 22 2.5
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 22 3.3
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 5.8
AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450 ... 21 7.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.7
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 21 7.7
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 7.7
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 7.7
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 23.4 bits (48), Expect = 1.1
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 177 IRC*CYSTRRDGGCGGRNISLYLVERKEGSPTARSSRRESA 299
+ C YS R G R + K+G+PTA R +A
Sbjct: 194 VYCTRYSDRPSSGRSPRTRRVKKPGAKQGAPTAEEKRPRTA 234
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 22.2 bits (45), Expect = 2.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 366 CTRKYYFANKIIFPLHYVLLL 304
C++K + N IF L+ VLLL
Sbjct: 108 CSKKSFRMNFAIFNLYMVLLL 128
Score = 21.8 bits (44), Expect = 3.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -1
Query: 317 MFCYYLRRFAP*APCGGGTFLSFHQV 240
MF YY+ R C FL FH V
Sbjct: 143 MFQYYIGRSFTYYVCNTTIFLIFHSV 168
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.8 bits (44), Expect = 3.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 274 AVGEPSFLSTK*REMFRPPQPPS 206
+V EP+ +T E RPP PS
Sbjct: 398 SVPEPTISTTPRPEWARPPSTPS 420
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.0 bits (42), Expect = 5.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 331 FSAALCSATIFADSRLE 281
F A+C+ T+FA + E
Sbjct: 9 FILAICACTVFAQQQAE 25
>AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 463
Score = 20.6 bits (41), Expect = 7.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 283 ELRAVGEPSFLSTK*REMF 227
E+RA P+F S+K + M+
Sbjct: 86 EMRATLSPAFTSSKIKNMY 104
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 7.7
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 357 KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 265
KY + P Y+LL+ + +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 7.7
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 357 KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 265
KY + P Y+LL+ + +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 20.6 bits (41), Expect = 7.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 40 NGKLVLSRFQSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGS 171
NG+ S FQ VP H RF PQ + +++ S+G+
Sbjct: 20 NGEEFCS-FQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSEGN 62
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 20.6 bits (41), Expect = 7.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 40 NGKLVLSRFQSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGS 171
NG+ S FQ VP H RF PQ + +++ S+G+
Sbjct: 20 NGEEFCS-FQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSEGN 62
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 20.6 bits (41), Expect = 7.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 40 NGKLVLSRFQSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGS 171
NG+ S FQ VP H RF PQ + +++ S+G+
Sbjct: 22 NGEEFCS-FQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSEGN 64
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,048
Number of Sequences: 336
Number of extensions: 2026
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -