Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M21
(567 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 198 6e-50
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 193 3e-48
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 178 8e-44
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 153 3e-36
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 135 6e-31
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 132 4e-30
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 131 1e-29
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 125 8e-28
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 111 1e-23
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 110 3e-23
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 101 1e-20
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 85 8e-16
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 84 2e-15
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 81 2e-14
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 78 1e-13
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 77 3e-13
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 76 7e-13
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 64 3e-09
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 63 5e-09
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 62 1e-08
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 60 4e-08
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 60 5e-08
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 58 1e-07
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 56 4e-07
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 55 1e-06
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 55 1e-06
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 54 2e-06
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 53 4e-06
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 53 5e-06
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 51 2e-05
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 50 4e-05
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 50 5e-05
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 49 9e-05
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 45 0.001
UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2; Wolbach... 45 0.001
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 45 0.001
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 42 0.010
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 40 0.031
UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7; Mollicu... 38 0.22
UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5; Bacteri... 37 0.29
UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10; ... 36 0.50
UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycopla... 35 1.2
UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: Fli... 34 2.0
UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2; Halobacter... 34 2.0
UniRef50_A2TXB8 Cluster: Putative uncharacterized protein; n=2; ... 34 2.7
UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1; Fusoba... 32 8.1
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 198 bits (484), Expect = 6e-50
Identities = 97/115 (84%), Positives = 101/115 (87%), Gaps = 1/115 (0%)
Frame = +2
Query: 131 KSIEQPQAXVSPX-HRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRI 307
K IE+P S HRIR TLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 308 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 472
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 193 bits (470), Expect = 3e-48
Identities = 91/102 (89%), Positives = 97/102 (95%)
Frame = +2
Query: 170 HRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 349
HRIR TLTSRNV+SLE VCADLI GAK++ L+VKGPVRMPTK LRITTRKTPCGEGSKTW
Sbjct: 18 HRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTW 77
Query: 350 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 475
DRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 78 DRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 178 bits (433), Expect = 8e-44
Identities = 85/115 (73%), Positives = 99/115 (86%)
Frame = +2
Query: 125 QAKSIEQPQAXVSPXHRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILR 304
Q ++ Q S HRIR TLTSRNVR+LE VC+DL+N AK ++LRVKGPVR+PTKIL+
Sbjct: 3 QVAKDQKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILK 62
Query: 305 ITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 469
ITTRKTP GEGSKTW+ ++MRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIA
Sbjct: 63 ITTRKTPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEVEVTIA 117
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 153 bits (371), Expect = 3e-36
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +2
Query: 233 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIV 412
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL+SPSEIV
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIV 462
Query: 413 KQITSINIEPGVEVEVTIAD 472
KQITSI++EPGVEVEVTIA+
Sbjct: 463 KQITSISLEPGVEVEVTIAN 482
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 135 bits (327), Expect = 6e-31
Identities = 66/113 (58%), Positives = 81/113 (71%)
Frame = +2
Query: 131 KSIEQPQAXVSPXHRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRIT 310
K + PQ +S +R TLT+ +++ LE V LI AK Q LRVKGPVRMPTK+LR+T
Sbjct: 8 KKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPTKVLRVT 65
Query: 311 TRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 469
TRKTPCGEGSKTWDRFQ+RIHKRVIDL S E Q+ I +EPGV +V ++
Sbjct: 66 TRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEPGVNCDVIVS 118
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 132 bits (320), Expect = 4e-30
Identities = 58/99 (58%), Positives = 79/99 (79%)
Frame = +2
Query: 176 IRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 355
I T+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRITTRKTPCGEGSKTWD
Sbjct: 20 ITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRITTRKTPCGEGSKTWDH 79
Query: 356 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 472
+QMRI+KRV+ + + E VK+ITS+ +EPGVE+EV + D
Sbjct: 80 YQMRIYKRVLSMKTTPETVKEITSLKVEPGVELEVAMFD 118
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 131 bits (317), Expect = 1e-29
Identities = 55/108 (50%), Positives = 82/108 (75%)
Frame = +2
Query: 149 QAXVSPXHRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 328
QA + +R T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRKTPC
Sbjct: 8 QAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRKTPC 67
Query: 329 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 472
G G+ TWD F+++I+KR+IDLH+P+E VK+ITS +E GV+V +TI D
Sbjct: 68 GNGTNTWDTFELKIYKRIIDLHAPTEQVKKITSFTMESGVDVSITILD 115
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 125 bits (301), Expect = 8e-28
Identities = 57/99 (57%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKK-QKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 349
R+R TLT +N++S+E +++++ AKK +++ VKGPVRMPTK L IT RK+PCGEGSKTW
Sbjct: 18 RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVITVRKSPCGEGSKTW 77
Query: 350 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 466
DRF+MRI+KR+IDL VK IT+ I+PGVE+E+T+
Sbjct: 78 DRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGVEIELTM 116
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 111 bits (266), Expect = 1e-23
Identities = 44/97 (45%), Positives = 68/97 (70%)
Frame = +2
Query: 176 IRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 355
+R TLTS+++ SLE C ++I K+ ++GP+R+PTK + + RK+PCGEG+ TWD+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 356 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 466
F+M+IHKR+ID HS IT IN++ G+E++ I
Sbjct: 76 FEMKIHKRIIDFHSNKSEFNSITPINLDNGIEIDAQI 112
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 110 bits (264), Expect = 3e-23
Identities = 49/101 (48%), Positives = 71/101 (70%)
Frame = +2
Query: 164 PXHRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 343
P +IR T+TS + +L+ V +L+ KK L V+GP+ MP + LRITTR+ PCG G++
Sbjct: 20 PVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPMPRRRLRITTRRAPCGNGTE 79
Query: 344 TWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 466
T+D F++RI+KRVID +E VKQ+T I +EP V VEV++
Sbjct: 80 TYDHFELRIYKRVIDFQGTAEAVKQVTQIALEPDVHVEVSV 120
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 101 bits (242), Expect = 1e-20
Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAK----KQKLRV--KGPVRMPTKILRITTRKTPCGE 334
+IR +TSR+ + LE +I + Q +V KGPVRMPTK L++T RK+PCGE
Sbjct: 17 KIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHLKMTVRKSPCGE 76
Query: 335 GSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 466
GSKTWDRF+MRIHKRVID K IT+ I PG+ VE+ +
Sbjct: 77 GSKTWDRFEMRIHKRVIDFQCTLPTFKDITNFKIGPGINVELNV 120
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 85.4 bits (202), Expect = 8e-16
Identities = 34/94 (36%), Positives = 64/94 (68%)
Frame = +2
Query: 179 RXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 358
R LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PCG G++T++++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 359 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEV 460
+MR+H+R+ID+ + + ++++ + I V +E+
Sbjct: 66 EMRMHRRIIDISADDKTIRRLIDLKIPDDVHLEL 99
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 84.2 bits (199), Expect = 2e-15
Identities = 35/98 (35%), Positives = 60/98 (61%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
+ R L+ N R L+ +C+ + A K + + GPV +PT+ + + RK P GEGS+TWD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 353 RFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 466
++MR+HKR+ID+ + ++QI I + V +E+ +
Sbjct: 67 HWEMRVHKRLIDISADERALRQIMRIQVPRDVNIEIVL 104
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 80.6 bits (190), Expect = 2e-14
Identities = 33/97 (34%), Positives = 61/97 (62%)
Frame = +2
Query: 176 IRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 355
+R + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P G+G T+D
Sbjct: 23 VRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGYHTYDH 82
Query: 356 FQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 466
++MRIHKRV+D+ + ++Q+ + I V+VE+ +
Sbjct: 83 WEMRIHKRVVDMDADERALRQLMRLRIPEDVKVEIEL 119
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/101 (35%), Positives = 62/101 (61%)
Frame = +2
Query: 164 PXHRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 343
P + R + S +V+S+E V + A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 344 TWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 466
+D ++MRIHKR+ID+ ++++ I I + V +E+ I
Sbjct: 63 VFDHWEMRIHKRLIDVELNDKVMRNIMRIRVPSNVYIEIQI 103
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/68 (58%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +2
Query: 170 HRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 349
HRIR TLTSRNV+SLE VCADLI GAK++ L+VKGPVRMPTK+ ++ + + C + W
Sbjct: 18 HRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV-QLESYISQC--AAVCW 74
Query: 350 D-RFQMRI 370
+ +FQ RI
Sbjct: 75 ESKFQHRI 82
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 75.8 bits (178), Expect = 7e-13
Identities = 30/98 (30%), Positives = 58/98 (59%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
+ R L S N+ SL V + N A+K ++V GP+ +PT + + + P GEG K W+
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Query: 353 RFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTI 466
++M++HKR+ID+ + +++Q+ + + V +E+ +
Sbjct: 64 HWEMKVHKRIIDIAADERVMRQLMRVRVPDDVYIEIEL 101
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 63.7 bits (148), Expect = 3e-09
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 266 VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIE-P 442
+ GP R P + L ITTRK+PCGEG+ TW RF++R++KR + + I S + P
Sbjct: 53 ISGPCRAPVRRLTITTRKSPCGEGTNTWHRFELRMYKRTFWVTCGGNDISTILSKTVVIP 112
Query: 443 GVEVEVTIAD 472
G++V V + +
Sbjct: 113 GIQVTVEVEE 122
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 62.9 bits (146), Expect = 5e-09
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +2
Query: 359 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 475
+M+IH ++IDL SPSEIVKQITS++IEP VE EVTIADA
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEVEAEVTIADA 71
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +2
Query: 176 IRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 355
+R + S ++ L V + K+ ++++GP+ +PTKILR+ + G+K WD
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 356 FQMRIHKRVIDLHSPSEIVK 415
+QMRIH+R+ID+ + +K
Sbjct: 64 YQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
RIR L + + R L+ A ++ K+ ++GP+ MPTKI R T K+P + +
Sbjct: 3 RIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP-HINKDSRE 61
Query: 353 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEV 460
+F++RIH R++D+ + + + V +T +++ P V VEV
Sbjct: 62 QFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEV 98
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 59.7 bits (138), Expect = 5e-08
Identities = 28/100 (28%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
+IR L + + + L+ +++ A++ +V GP+ +PT+I R T ++P + K+ +
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSRE 63
Query: 353 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTIA 469
+F++R HKR++D+ P+ + V Q+ +++ GV+VE+ ++
Sbjct: 64 QFEVRTHKRMLDILEPTQQTVDQLMKLDLSAGVDVEIKLS 103
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +2
Query: 149 QAXVSPXHRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 328
QA +IR L S ++ C ++ AK + RV GPV +PTK ++P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTKRRIFCVLRSP- 89
Query: 329 GEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEVTI 466
+ + F+ R H R+ID+H P ++ + + ++ + GV+VE+ +
Sbjct: 90 HVNKDSREHFETRTHHRLIDVHQPTAQTIDALMALELPSGVDVEIKL 136
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 56.4 bits (130), Expect = 4e-07
Identities = 30/112 (26%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +2
Query: 128 AKSIEQPQAXVSPXHRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRI 307
AK +QP+ S +IR L + R L+ D++ AK+ + GP+ +PT +
Sbjct: 2 AKQEKQPK---SARQKIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKF 58
Query: 308 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEV 460
T ++P K+ ++F++R H+R+ID+ +P S+ + + ++ + GV++++
Sbjct: 59 TVLRSP-NIDRKSREQFEIRTHRRLIDILNPTSKTIDALKTLTLPAGVDIKI 109
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/100 (26%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +2
Query: 170 HRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 349
++I+ L S + RSL+ ++++ K+ + GP+ +P KI R T ++P K+
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP-HVHKKSR 61
Query: 350 DRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 466
++F++R HKR++ + P+ +V ++ +++ GV+V + +
Sbjct: 62 EQFEIRKHKRLLVIDDPNPAVVDALSKVDLAAGVDVVIEL 101
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
RIR L + + R ++ D++ AK+ +V GP+ +PTK R T +P D
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARD 63
Query: 353 RFQMRIHKRVIDLHSPSE-IVKQITSINIEPGVEVEVTI 466
++++R HKR+ID+ P++ V + +++ GV+V++++
Sbjct: 64 QYEIRTHKRLIDIVDPTDKTVDALMKLDLAAGVDVQISL 102
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
+IR L S + L +++ AK+ V GP+ +PT++ R T K+P + K+ +
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKSRE 61
Query: 353 RFQMRIHKRVIDLHS-PSEIVKQITSINIEPGVEVEVTIAD 472
+FQ+ +HK +++L S + ++ T+ + GV++ V + D
Sbjct: 62 QFQLAVHKCLLELSSFNAHLLSTFTNFQLPAGVDISVEVRD 102
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 53.2 bits (122), Expect = 4e-06
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 128 AKSIEQPQAXVSPXHRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRI 307
+ SI ++P +IR L S V +E C +++ A+ + GPV +PTK
Sbjct: 79 SSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIY 138
Query: 308 TTRKTPCGEGSKTWDRFQMRIHKRVID-LHSPSEIVKQITSINIEPGVEVEVTI 466
K+P + F++R H+R+ID L+ ++ + + +++ GV+VEV +
Sbjct: 139 CVLKSPHVHKDARF-HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 52.8 bits (121), Expect = 5e-06
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
RIR L S + R ++ +++ AK+ +V GP+ MPT+I R +P D
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARD 63
Query: 353 RFQMRIHKRVIDLHSPSE-IVKQITSINIEPGVEVEVTI 466
++++R +KR+ID+ P++ V + +++ GV+V++ +
Sbjct: 64 QYEIRTYKRLIDIVQPTDKTVDALMKLDLAAGVDVQIAL 102
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/99 (26%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
+IR L + R L+ ++ AK+ + GP+ +PT+ T ++P + + +
Sbjct: 5 KIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSRE 63
Query: 353 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 466
+F+MR HKR+ID+ +P+ + V + +++ GV++E+ +
Sbjct: 64 QFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSGVDIEIKL 102
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 50.0 bits (114), Expect = 4e-05
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
+IR L + + R L+ C +I A + GP+ +PTK ++P + +
Sbjct: 9 KIRIRLKAFDRRMLDLSCDKIIETADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-E 67
Query: 353 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 466
F+ R H+R+ID++SPS + + + +++ GV++EV +
Sbjct: 68 HFETRTHRRIIDIYSPSAKTIDALMKLDLPSGVDIEVKL 106
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 49.6 bits (113), Expect = 5e-05
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
++R L+S + L C +++ K+ VKGPV +PT+ ++P + +
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLRSP-HVNKDSRE 70
Query: 353 RFQMRIHKRVIDLHS-PSEIVKQITSINIEPGVEVEV 460
F++R H R+ID+ S SE ++ + +++ GV +E+
Sbjct: 71 HFEIRSHFRIIDISSCSSETIEMLMRLDLPTGVNIEI 107
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 48.8 bits (111), Expect = 9e-05
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
+IR L + + R L+ ++ AK+ V GP+ +PT+ I T + + +
Sbjct: 5 KIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSRE 63
Query: 353 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEVEVTI 466
+F+MR HKR+ID+ +P+ + V + +++ GV++E+ +
Sbjct: 64 QFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL 102
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 188 LTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMR 367
+ S + + VC + K ++ +P K+ ITT + P G+G+K W R++M
Sbjct: 25 MASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWSRYKMI 84
Query: 368 IHKRVIDLHSP-SEIVKQITSINIEPGVEVEVTI 466
+H R L + ++ K + + P VE+ ++I
Sbjct: 85 VHLRNFYLEATHQQLEKVVQFLRNFPHVEINLSI 118
>UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2;
Wolbachia|Rep: 30S ribosomal protein S10 - Wolbachia
pipientis wMel
Length = 109
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +2
Query: 212 LEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL 391
LE I+ K+ ++ GP+ +P K + ++P + K+ ++F+MR +R+I L
Sbjct: 17 LEECVRKFIDELKRSSAKLSGPIALPRKDSKFIVNRSPHVD-KKSREQFEMRTSRRLIVL 75
Query: 392 HSPSEIVKQ-ITSINIEPGVEVEVTIAD 472
H + + Q +T ++ GVEV++ + +
Sbjct: 76 HDLTPTMMQMLTGLSFSAGVEVDLKVKE 103
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +2
Query: 170 HRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 349
+ ++ L S + R L+ +I ++ +VKGP+ +PTK T ++P +
Sbjct: 3 NEMKIKLFSYDHRLLDQSVRKIIKSSQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSR 61
Query: 350 DRFQMRIHKRVIDLHSPSEIVKQ-ITSINIEPGVEVEVTI 466
++F+ R H+R+I L + +E K+ + +I I GV++++T+
Sbjct: 62 EQFERRTHQRLIILLNTTEKTKEYLKNIIIPSGVDIQITL 101
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 41.9 bits (94), Expect = 0.010
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
+IR L S + ++ ++ K V GP+ +PT RI T K+ +
Sbjct: 4 KIRIKLKSYDHNLVDKSAEKIVRTVKATGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSRE 62
Query: 353 RFQMRIHKRVIDLH-SPSEIVKQITSINIEPGVEVEVTI 466
+F++ +KR+ID++ S ++ V + + + GVEVE+ +
Sbjct: 63 QFELSSYKRLIDIYSSTAKTVDALMKLELPSGVEVEIKV 101
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 40.3 bits (90), Expect = 0.031
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 188 LTSRNVRSLEXVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQM 364
L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P + K+ ++F++
Sbjct: 10 LKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KKSREQFEI 68
Query: 365 RIHKRVIDLHS 397
R + + I + S
Sbjct: 69 RTYTKTIQIES 79
>UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7;
Mollicutes|Rep: 30S ribosomal protein S10 - Mycoplasma
pulmonis
Length = 103
Score = 37.5 bits (83), Expect = 0.22
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 245 AKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQI 421
A K+K+ GP+ +PTK I T K+ ++F+ R +KR I ++P + V+ +
Sbjct: 29 ASKEKIDYSGPIPLPTK-REIFTILRSVHVNKKSREQFERRTYKRFIVFNNPGPKFVEIL 87
Query: 422 TSINIEPGVEVEVTI 466
+ GVEVE +
Sbjct: 88 KRTEMPAGVEVEFKV 102
>UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5;
Bacteria|Rep: 30S ribosomal protein S10 - Onion yellows
phytoplasma
Length = 107
Score = 37.1 bits (82), Expect = 0.29
Identities = 19/94 (20%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +2
Query: 176 IRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 355
I+ L + + ++ +I+ K ++GP+ +PT+ T ++P + ++
Sbjct: 9 IKIILRAYDHHLIDQSAKKIIDILTKTGANIEGPIPLPTRKEVFTVLRSPF-VNKDSREQ 67
Query: 356 FQMRIHKRVIDLHSPS-EIVKQITSINIEPGVEV 454
F+ R HKR+I + +P+ + ++ + I++ P +++
Sbjct: 68 FERRTHKRLIQIINPNKKTIESLMHISLPPAIDI 101
>UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10;
n=3; Bacillariophyta|Rep: Chloroplast 30S ribosomal
protein S10 - Phaeodactylum tricornutum
Length = 107
Score = 36.3 bits (80), Expect = 0.50
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 173 RIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 352
+IR L S N L C ++N + G + +PT+ ++P + +
Sbjct: 8 KIRVRLESFNHELLNSSCQKIVNILQNTLSNSIGVITLPTRKRIYCVLRSPHVDKDSR-E 66
Query: 353 RFQMRIHKRVIDLHSPSE--IVKQITSINIEPGVEVEVTIA 469
F++R HKR+++++ SE I ++ ++ PGV + ++
Sbjct: 67 HFEIRTHKRILEIYYNSEVPIFDLLSEADLPPGVFYRICLS 107
>UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S10 -
Mycoplasma hyopneumoniae (strain 232)
Length = 106
Score = 35.1 bits (77), Expect = 1.2
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = +2
Query: 176 IRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 355
I+ L S + R ++ +I A++ + +GPV +PT I T K+ ++
Sbjct: 6 IKIKLKSFDHRQIDAAAKKIILLARELNIETRGPVPLPTS-RAIYTILRSVHINKKSREQ 64
Query: 356 FQMRIHKRVIDLH----SPSEIVKQITSINIEPGVEVEVTIA 469
F+ R HKR++ L + + ++I+ + GV +E+ ++
Sbjct: 65 FESRTHKRLVILKVLPTNQKLVTEKISRSQLPAGVWIEIEVS 106
>UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: FliF
protein - Bradyrhizobium japonicum
Length = 519
Score = 34.3 bits (75), Expect = 2.0
Identities = 22/88 (25%), Positives = 41/88 (46%)
Frame = +2
Query: 134 SIEQPQAXVSPXHRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITT 313
S E P+ S R+R L ++ +R++ + A +NG K Q++ + T
Sbjct: 140 SREAPEPSASIVVRVRGALEAQQIRAIRHLVASAVNGLKPQRVSIVDEAGQLLADGAATD 199
Query: 314 RKTPCGEGSKTWDRFQMRIHKRVIDLHS 397
+ G+ +T F+ R+ K+V D+ S
Sbjct: 200 PEQALGDERRT--TFEKRMRKQVEDIVS 225
>UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2;
Halobacteriaceae|Rep: Ribosomal protein S10p -
Haloarcula marismortui (Halobacterium marismortui)
Length = 138
Score = 34.3 bits (75), Expect = 2.0
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 185 TLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQM 364
T TS + LE ++ A+++ + +KGP + LRI K+ +G + +D +
Sbjct: 36 TFTSGDRHRLEDTVTEIKQSAEQKGVELKGPHPKQPQELRIPQSKSLGPDGGR-FDSWTH 94
Query: 365 RIHKRVIDLHSPSEIVKQIT------SINIEPGVE 451
++ R I++ E + +T +I++E GVE
Sbjct: 95 TVYTRTIEIVGYEEFARDVTQRTFPNAIHVEAGVE 129
>UniRef50_A2TXB8 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter dokdonensis MED152
Length = 115
Score = 33.9 bits (74), Expect = 2.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 26 NVRFLRFSAXQFLLAKLFLSAGIQQATWQPL 118
NV FL++S L A + S ++Q TWQP+
Sbjct: 55 NVAFLKYSGISLLAALVLTSISVEQLTWQPM 85
>UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
SSU ribosomal protein S10P - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 78
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +2
Query: 284 MPTKILRITT-RKTPCGEGSKTWDRFQMRIHKRVIDL-HSPSEIVKQITSINI 436
+PT+I + T R + S+ ++F+MR+H+R+I+L +S + + +TS+++
Sbjct: 3 LPTRIRKYTVLRSLHVNKDSR--EQFEMRVHRRMIELVNSTDKAISSLTSVHL 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,418,005
Number of Sequences: 1657284
Number of extensions: 8800541
Number of successful extensions: 20857
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 20445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20837
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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