Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M21
(567 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y11119-1|CAA72004.1| 120|Drosophila melanogaster S20 ribosomal ... 198 4e-51
AY071742-1|AAL49364.1| 120|Drosophila melanogaster RH47995p pro... 198 4e-51
AE014297-2870|AAF55809.1| 120|Drosophila melanogaster CG15693-P... 198 4e-51
AY071353-1|AAL48975.1| 120|Drosophila melanogaster RE38972p pro... 193 1e-49
X56232-1|CAA39689.1| 568|Drosophila melanogaster disco gene pro... 28 7.7
BT003295-1|AAO25055.1| 568|Drosophila melanogaster GH27656p pro... 28 7.7
AE014298-2336|ABC67185.1| 568|Drosophila melanogaster CG9908-PB... 28 7.7
AE014298-2335|AAF48568.1| 568|Drosophila melanogaster CG9908-PA... 28 7.7
>Y11119-1|CAA72004.1| 120|Drosophila melanogaster S20 ribosomal
protein protein.
Length = 120
Score = 198 bits (483), Expect = 4e-51
Identities = 97/115 (84%), Positives = 101/115 (87%), Gaps = 1/115 (0%)
Frame = +2
Query: 131 KSIEQPQAXVSPX-HRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRI 307
K IE+P S HRIR TLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 308 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 472
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>AY071742-1|AAL49364.1| 120|Drosophila melanogaster RH47995p
protein.
Length = 120
Score = 198 bits (483), Expect = 4e-51
Identities = 97/115 (84%), Positives = 101/115 (87%), Gaps = 1/115 (0%)
Frame = +2
Query: 131 KSIEQPQAXVSPX-HRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRI 307
K IE+P S HRIR TLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 308 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 472
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>AE014297-2870|AAF55809.1| 120|Drosophila melanogaster CG15693-PA
protein.
Length = 120
Score = 198 bits (483), Expect = 4e-51
Identities = 97/115 (84%), Positives = 101/115 (87%), Gaps = 1/115 (0%)
Frame = +2
Query: 131 KSIEQPQAXVSPX-HRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRI 307
K IE+P S HRIR TLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 308 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 472
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>AY071353-1|AAL48975.1| 120|Drosophila melanogaster RE38972p
protein.
Length = 120
Score = 193 bits (471), Expect = 1e-49
Identities = 95/115 (82%), Positives = 100/115 (86%), Gaps = 1/115 (0%)
Frame = +2
Query: 131 KSIEQPQAXVSPX-HRIRXTLTSRNVRSLEXVCADLINGAKKQKLRVKGPVRMPTKILRI 307
K IE+P S H IR TLTSRNVRSLE VC DLINGAK Q LRV+GPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65
Query: 308 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 472
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>X56232-1|CAA39689.1| 568|Drosophila melanogaster disco gene
protein.
Length = 568
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 7 LFQKXLKRAVSPVQRXTIFACKVVSLGRHSTSNMAAAVVSGKVHRATPGXGLPXSPHQXH 186
L ++R +SP T V S G + AAA V+G++ A PG P PH H
Sbjct: 148 LHSPHIRRKISPHDGRTAQQFPVFSPGTAA----AAAAVAGRLPVAFPGLLPPPPPHHGH 203
>BT003295-1|AAO25055.1| 568|Drosophila melanogaster GH27656p
protein.
Length = 568
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 7 LFQKXLKRAVSPVQRXTIFACKVVSLGRHSTSNMAAAVVSGKVHRATPGXGLPXSPHQXH 186
L ++R +SP T V S G + AAA V+G++ A PG P PH H
Sbjct: 148 LHSPHIRRKISPHDGRTAQQFPVFSPGTAA----AAAAVAGRLPVAFPGLLPPPPPHHGH 203
>AE014298-2336|ABC67185.1| 568|Drosophila melanogaster CG9908-PB,
isoform B protein.
Length = 568
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 7 LFQKXLKRAVSPVQRXTIFACKVVSLGRHSTSNMAAAVVSGKVHRATPGXGLPXSPHQXH 186
L ++R +SP T V S G + AAA V+G++ A PG P PH H
Sbjct: 148 LHSPHIRRKISPHDGRTAQQFPVFSPGTAA----AAAAVAGRLPVAFPGLLPPPPPHHGH 203
>AE014298-2335|AAF48568.1| 568|Drosophila melanogaster CG9908-PA,
isoform A protein.
Length = 568
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 7 LFQKXLKRAVSPVQRXTIFACKVVSLGRHSTSNMAAAVVSGKVHRATPGXGLPXSPHQXH 186
L ++R +SP T V S G + AAA V+G++ A PG P PH H
Sbjct: 148 LHSPHIRRKISPHDGRTAQQFPVFSPGTAA----AAAAVAGRLPVAFPGLLPPPPPHHGH 203
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,453,694
Number of Sequences: 53049
Number of extensions: 425608
Number of successful extensions: 1008
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -