Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M20
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 197 6e-51
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 149 3e-36
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.71
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 30 2.2
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 28 6.6
AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 28 6.6
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 197 bits (481), Expect = 6e-51
Identities = 110/218 (50%), Positives = 136/218 (62%), Gaps = 4/218 (1%)
Frame = +1
Query: 88 PRXLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTPAER 264
P L N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +ASYT AER
Sbjct: 8 PAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAER 67
Query: 265 KTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXLKAYAD 438
KTW+ G++P DLFGS L AYA+
Sbjct: 68 KTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEERLAAYAE 115
Query: 439 KKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQ 618
KK+KK IAKSS++LDVKPWDDETD+ EME VR+IEM+GL+WG +KL+P+GYGI KLQ
Sbjct: 116 KKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQ 175
Query: 619 IMCVIEDDKVSVDLLTEKIQ-EFEXFVQSVDIAAFNKI 729
I+ VIED KVSVD L EKI +FE VQSVDI AFNKI
Sbjct: 176 IITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNKI 213
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 149 bits (360), Expect = 3e-36
Identities = 77/125 (61%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
Frame = +1
Query: 358 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 537
DLFGS L AYA KK+ K IAKSS++LDVKPWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198
Query: 538 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEXFVQSVDIA 714
VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI +FE VQSVDI
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIV 258
Query: 715 AFNKI 729
AFNKI
Sbjct: 259 AFNKI 263
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 259 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 122
QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 475 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSV 654
SI+L VKP DDE ++++ NQ M G LW A++ Y ++ I V V
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSYVCVRVLKFLYIMCKSVLV 489
Query: 655 DLLTEK 672
+T K
Sbjct: 490 HFITPK 495
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
M01F1.7 protein.
Length = 1034
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 103 DLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKT 270
D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P ++K+
Sbjct: 875 DVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKS 930
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 259 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 122
QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 103 DLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKT 270
D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P ++K+
Sbjct: 875 DVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKS 930
>AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical
protein Y51A2D.12 protein.
Length = 334
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 720 KCSNVNRLYKXFKFLNFFCQQINRNFVVLDDTHNL 616
KC+ NRL + FK FF + N N VV+ NL
Sbjct: 294 KCAESNRLLEKFKNHRFFAES-NSNIVVMSLPKNL 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,400,405
Number of Sequences: 27780
Number of extensions: 331581
Number of successful extensions: 913
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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