Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M18
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    86   9e-19
AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    23   7.3  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.6  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 86.2 bits (204), Expect = 9e-19
 Identities = 39/92 (42%), Positives = 55/92 (59%)
 Frame = +2

Query: 122 IKASDALKPRLAEAGXKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 301
           +K S+    +L  AG +LVV+DF ATWCGPCK+I PKL+E   +                
Sbjct: 5   VKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECE 64

Query: 302 XXASEYNINSMPTFVFVKNGKKLDEFSGANVD 397
             A++YNI SMPTF+F+K  + + +FSGAN +
Sbjct: 65  ELAAQYNIASMPTFLFIKRKEVVGQFSGANAE 96


>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 41  LVVFLLCILNLCSXFXFQFXCPSLS 115
           LVV ++   + CS F FQ+  P LS
Sbjct: 12  LVVVVIAPRHQCSPFFFQYNRPYLS 36


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 441 LVSIYLCLRIVVLSLSTLAPE 379
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 441 LVSIYLCLRIVVLSLSTLAPE 379
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,316
Number of Sequences: 2352
Number of extensions: 11249
Number of successful extensions: 70
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)