BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M17
(461 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 0.79
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 24 0.79
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 2.4
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 22 2.4
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 22 2.4
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 22 3.2
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 3.2
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 21 4.2
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 21 7.4
DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory pro... 20 9.7
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 20 9.7
AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical pro... 20 9.7
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.8 bits (49), Expect = 0.79
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 129 CYMKIDPGKKTEKNKSEYVTKYAYDLNKRKCIKFPYSGYGGNVNRF-DSLNEC 284
CY + PG T+ +S +++ K+KCI++ +G G + N+ D+L C
Sbjct: 616 CYHAVAPG--TDIRQSIALSR------KKKCIRYMEAGDGNDGNQSDDNLGSC 660
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.8 bits (49), Expect = 0.79
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 129 CYMKIDPGKKTEKNKSEYVTKYAYDLNKRKCIKFPYSGYGGNVNRF-DSLNEC 284
CY + PG T+ +S +++ K+KCI++ +G G + N+ D+L C
Sbjct: 508 CYHAVAPG--TDIRQSIALSR------KKKCIRYMEAGDGNDGNQSDDNLGSC 552
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 111 LETYEVCYMKIDPGKKTEKNKSEYVTKYAY 200
L YE+C I G K +++ + YAY
Sbjct: 2102 LAYYEICTNVIKKGWKVVRDRRGRIGPYAY 2131
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 22.2 bits (45), Expect = 2.4
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +3
Query: 132 YMKIDPGKKTEKNKSEYVTKYAYDLNKRKCIKFPYSGYGGNV 257
Y K P + N YV Y + + YSG GG V
Sbjct: 361 YNKNHPNSENYINHQNYVQGYQGEHPNYNHYGYHYSGDGGEV 402
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 22.2 bits (45), Expect = 2.4
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +3
Query: 132 YMKIDPGKKTEKNKSEYVTKYAYDLNKRKCIKFPYSGYGGNV 257
Y K P + N YV Y + + YSG GG V
Sbjct: 309 YNKNHPNSENYINHQNYVQGYQGEHPNYNHYGYHYSGDGGEV 350
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 90 VLNICNGLETYEVCYMKIDPGKKTEKNKS 176
+ +IC +Y +++D G KT+ S
Sbjct: 270 LFSICGAASSYLFIMLQLDIGSKTQGTNS 298
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/23 (34%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 49 LCVFH*YYCF-LYTLF*IFAMAL 114
LCV++ YY F ++T+ +F + +
Sbjct: 111 LCVYYFYYAFIIFTVHLLFLLCI 133
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.4 bits (43), Expect = 4.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 302 RITRFYAFI*RIKSVYVPSIARVRKFNAFP 213
R TRF F IK Y P + + A+P
Sbjct: 254 RATRFNDFNEAIKEAYFPKLDSLVSSRAWP 283
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 20.6 bits (41), Expect = 7.4
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 69 LLFFIYAVLNICNGLETYEVCYMKIDPGKKTEKN 170
+LFFIY + L T ++ Y P + +K+
Sbjct: 18 ILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQKKS 51
>DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory
protein 2 protein.
Length = 122
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 171 KSEYVTKYAYDLNK 212
K EY T+YA+ L K
Sbjct: 108 KGEYQTQYAHYLEK 121
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 20.2 bits (40), Expect = 9.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 230 KFNAFPFVQVIGVLCNVFR 174
+FN P +++ LC FR
Sbjct: 22 EFNGLPEEKLLDALCQSFR 40
>AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical
protein protein.
Length = 122
Score = 20.2 bits (40), Expect = 9.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 171 KSEYVTKYAYDLNK 212
K EY T+YA+ L K
Sbjct: 108 KGEYQTQYAHYLEK 121
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,631
Number of Sequences: 336
Number of extensions: 1919
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -