Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M15
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   1.6  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   2.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.6  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 473 WQGNGVVYTRHRA*LAGTQRGPGQSGKVKRLSRRETKVCARQARLVARHQTEGVG*EGHA 652
           W G  +V  +HR  L G +R    +    +L     + C   + L+ RH  EGV  E H+
Sbjct: 323 WGGGALVSAKHRHLLKGIERADSVTWNPHKLLTAPQQ-C---STLLLRH--EGVLAEAHS 376

Query: 653 RN 658
            N
Sbjct: 377 TN 378


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 519 QEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVIKQK 629
           +EH  VLVR+ R +D   VKL  +    +L  V+ ++
Sbjct: 37  KEHCYVLVRLARFRD--SVKLSKIPNNVNLMDVVARE 71


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 510 HNLQEHNVVLVRVGRLKDCPGVKLKCVRGKHDLSHVI 620
           HN  EH + L       +CP V+L  +     ++ VI
Sbjct: 361 HNTIEHLLPLFLTQLKDECPEVRLNIISNLDCVNEVI 397


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 496 YPASGITCRNTTWS 537
           YPA+ I+C    WS
Sbjct: 166 YPANEISCPQVQWS 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,722
Number of Sequences: 336
Number of extensions: 3616
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)