Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M15
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    28   0.38 
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    28   0.38 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.3  

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 280 LVSSRGQWRLWPRCTELDLTLRRGNLGIRLTGI 378
           L+  R  +  WP   E+DL   RGN  + L G+
Sbjct: 196 LLPKRNAYGTWPASGEMDLMESRGNENLYLDGV 228


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 280 LVSSRGQWRLWPRCTELDLTLRRGNLGIRLTGI 378
           L+  R  +  WP   E+DL   RGN  + L G+
Sbjct: 196 LLPKRNAYGTWPASGEMDLMESRGNENLYLDGV 228


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 536  PGQSGKVKRLSRRETKVCARQARLVARHQ 622
            P       R S R   + AR ARL  RH+
Sbjct: 1074 PSMPSSSPRTSERRANIRARMARLRQRHR 1102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,167
Number of Sequences: 2352
Number of extensions: 15925
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)