Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M12
(472 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 195 5e-49
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 191 8e-48
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 170 2e-41
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 169 3e-41
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 168 5e-41
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 167 1e-40
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 165 3e-40
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 163 2e-39
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 159 2e-38
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 155 4e-37
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 155 5e-37
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 154 8e-37
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 153 2e-36
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 152 3e-36
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 152 4e-36
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 152 4e-36
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 151 1e-35
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 150 1e-35
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 147 9e-35
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 143 2e-33
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 142 3e-33
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 138 6e-32
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 138 6e-32
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 138 8e-32
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 136 2e-31
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 134 9e-31
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 124 1e-27
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 124 1e-27
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 124 1e-27
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 122 4e-27
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 121 7e-27
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 114 1e-24
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 111 7e-24
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 109 2e-23
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 103 3e-21
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 96 3e-19
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 95 9e-19
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 92 5e-18
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 91 1e-17
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 87 2e-16
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 87 2e-16
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 84 1e-15
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 81 1e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 79 4e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 79 4e-14
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 78 1e-13
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 77 1e-13
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 77 3e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 76 3e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 75 1e-12
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 74 2e-12
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 73 2e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 73 2e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 73 2e-12
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 73 3e-12
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 73 4e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 4e-12
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 70 3e-11
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 67 2e-10
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 67 2e-10
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 66 4e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 66 4e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 66 5e-10
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 65 6e-10
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 8e-10
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 65 8e-10
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 64 1e-09
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 64 1e-09
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 63 3e-09
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 63 3e-09
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 63 3e-09
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 60 2e-08
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 60 2e-08
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 60 2e-08
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 59 6e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 6e-08
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 59 6e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 58 7e-08
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 54 1e-06
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 54 2e-06
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 54 2e-06
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 54 2e-06
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 53 3e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 52 8e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 52 8e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 50 3e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 49 5e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 8e-05
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 48 1e-04
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 48 1e-04
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 46 3e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 46 3e-04
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 43 0.003
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.021
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 40 0.021
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 39 0.064
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 33 2.4
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 33 3.2
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 4.2
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 4.2
UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha... 31 9.7
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 31 9.7
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 195 bits (475), Expect = 5e-49
Identities = 100/157 (63%), Positives = 106/157 (67%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF VENGAGTG TVYPPLSSNIAH G SVDLAIF
Sbjct: 62 APDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIF 121
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAGISS SFDQ+PLF+ AVGITA AGAIT+
Sbjct: 122 SLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITM 181
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRNLNTSFFDPAGGGDPILYQHLF F GHPEVYI
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYI 218
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 191 bits (465), Expect = 8e-48
Identities = 98/155 (63%), Positives = 105/155 (67%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF VENGAGTG TVYPPLSSNIAH G SVDLAIF
Sbjct: 86 APDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIF 145
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAGISS SFDQ+PLFV AVGITAF AGAIT+
Sbjct: 146 SLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITM 205
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEV 465
LLTDRNLNTSFFDPAGGGDPILYQHLF F GHP++
Sbjct: 206 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 170 bits (413), Expect = 2e-41
Identities = 91/157 (57%), Positives = 99/157 (63%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF VE GAGTG TVYPPL+ N+AH G SVDLAIF
Sbjct: 90 APDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIF 149
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAGISS S Q PLFV +V ITA A IT+
Sbjct: 150 SLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITM 209
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRNLNT+FFDPAGGGDPILYQHLF F GHPEVYI
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYI 246
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 169 bits (411), Expect = 3e-41
Identities = 88/157 (56%), Positives = 98/157 (62%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NNISF VE GAGTG TVYPPLS +H G SVDLAIF
Sbjct: 89 APDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIF 148
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHL+GISS + +LPLFV A+ +TA AGAIT+
Sbjct: 149 SLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITM 208
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRN NTSF+DPAGGGDPILYQHLF F GHPEVYI
Sbjct: 209 LLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYI 245
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 168 bits (409), Expect = 5e-41
Identities = 88/157 (56%), Positives = 97/157 (61%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF VE GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 89 APDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIF 148
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAG+SS S Q PLFV AV +TA A IT+
Sbjct: 149 SLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITM 208
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRNLNT+FFDPAGGGDPILYQHLF F GHPEVYI
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYI 245
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 167 bits (406), Expect = 1e-40
Identities = 86/157 (54%), Positives = 99/157 (63%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NNISF VE G+GTG TVYPPLS +H G +VDLAIF
Sbjct: 92 APDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIF 151
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHL+G+SS + +LPLFV +V +TAF AGAIT+
Sbjct: 152 SLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITM 211
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRN NT+FFDPAGGGDPILYQHLF F GHPEVYI
Sbjct: 212 LLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYI 248
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 165 bits (402), Expect = 3e-40
Identities = 86/157 (54%), Positives = 97/157 (61%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF VE GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 89 APDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIF 148
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAG+SS + Q PLFV +V +TA A IT+
Sbjct: 149 SLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITM 208
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRNLNT+FFDPAGGGDPILYQHLF F GHPEVYI
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYI 245
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 163 bits (396), Expect = 2e-39
Identities = 86/157 (54%), Positives = 96/157 (61%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF VE GAGTG TVYPPL+ N +H G SVDL IF
Sbjct: 89 APDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIF 148
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAG+SS + Q PLFV +V ITA A IT+
Sbjct: 149 SLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITM 208
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRNLNT+FFDPAGGGDPILYQHLF F GHPEVYI
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYI 245
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 159 bits (387), Expect = 2e-38
Identities = 83/157 (52%), Positives = 97/157 (61%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
+P +AFPR+NNISF VE G GTG TVYPPLSS +H G +VDLAIF
Sbjct: 97 SPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIF 156
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLH++G SS S ++PLFV ++ +TAF AGAIT+
Sbjct: 157 SLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITM 216
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRN NTSFFD +GGGDPILYQHLF F GHPEVYI
Sbjct: 217 LLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYI 253
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 155 bits (377), Expect = 4e-37
Identities = 80/157 (50%), Positives = 94/157 (59%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
+P ++FPR+NN+SF + G GTG TVYPPLS + H G SVDL IF
Sbjct: 73 SPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIF 132
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAG SS + D++ LF +V ITA AGAIT+
Sbjct: 133 SLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITM 192
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRN+NTSFFDP+GGGDPILYQHLF F GHPEVYI
Sbjct: 193 LLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYI 229
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 155 bits (376), Expect = 5e-37
Identities = 81/147 (55%), Positives = 90/147 (61%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF VE+GAGTG TVYPPLS N AH G SVDLAIF
Sbjct: 72 APDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIF 131
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAG+SS + + LFV +V ITA AGAIT+
Sbjct: 132 SLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITM 191
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF 441
LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 192 LLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 154 bits (374), Expect = 8e-37
Identities = 86/152 (56%), Positives = 95/152 (62%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP FPR N+SF VE GAGTG TV PPLS+NIAH G SVDLAIF
Sbjct: 8 APDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIF 67
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLH+AG+ S + ++PLFV AV ITA AGAIT+
Sbjct: 68 SLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAGAITM 127
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGH 456
LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 128 LLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 153 bits (371), Expect = 2e-36
Identities = 81/146 (55%), Positives = 97/146 (66%)
Frame = -3
Query: 440 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 261
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 260 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTXL 81
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P ST
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 80 LEINNIREGGRSQKLILFXRGNAIAG 3
L + ++EGG +Q L+LF RGNA++G
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSG 145
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 152 bits (369), Expect = 3e-36
Identities = 80/147 (54%), Positives = 90/147 (61%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NNISF VE GAGTG TVYPPLS +H G SVDLAIF
Sbjct: 89 APDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIF 148
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHL+GISS + +LPLFV A+ +TA AGAIT+
Sbjct: 149 SLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITM 208
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF 441
LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 209 LLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 152 bits (368), Expect = 4e-36
Identities = 81/151 (53%), Positives = 92/151 (60%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NNISF VE GAGTG TVYPPL+S AH G SVD+AIF
Sbjct: 90 APDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIF 149
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAG+SS + ++PLFV +V ITA AGAIT+
Sbjct: 150 SLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITM 209
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXG 453
LLTDR NT+FFDPAGGGDPILYQHLF F G
Sbjct: 210 LLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 152 bits (368), Expect = 4e-36
Identities = 80/153 (52%), Positives = 92/153 (60%)
Frame = +1
Query: 13 AFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 192
AFPRINNI+F VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 94 AFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHL 153
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
ISS + +LPLFV ++ ITAF + IT+LL D
Sbjct: 154 TSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLD 213
Query: 373 RNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
RN NTSFF+ +GGGDPILY+HLF F GHPEVYI
Sbjct: 214 RNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYI 246
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 151 bits (365), Expect = 1e-35
Identities = 81/157 (51%), Positives = 91/157 (57%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
A ++FPRIN+I F VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHL ISS S ++PLFV A+ ITAF + IT+
Sbjct: 150 SLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITM 209
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LL DRN NTSFF+ AGGGDPI YQH F F GHPEVYI
Sbjct: 210 LLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYI 246
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 150 bits (364), Expect = 1e-35
Identities = 79/156 (50%), Positives = 90/156 (57%)
Frame = +1
Query: 4 PAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 183
P + FPR+NNIS+ +ENG GTG T+YPPLS +H G SVDLAIF
Sbjct: 91 PDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFG 150
Query: 184 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 363
LHL+GISS +L LF AV ITA AG IT++
Sbjct: 151 LHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMV 210
Query: 364 LTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LTDRN NTSFF+ AGGGDPILYQHLF F GHPEVYI
Sbjct: 211 LTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYI 246
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 147 bits (357), Expect = 9e-35
Identities = 77/157 (49%), Positives = 87/157 (55%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP ++FPR+NN SF E G GTG TVYPPLSS +H G SVDL IF
Sbjct: 93 APDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIF 152
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
S HL GI S LPLFV +V +T+F A AIT+
Sbjct: 153 SFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITL 212
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LL DRN NTSF+DP GGGD +LYQHLF F GHPEVYI
Sbjct: 213 LLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYI 249
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 143 bits (346), Expect = 2e-33
Identities = 76/156 (48%), Positives = 88/156 (56%)
Frame = +1
Query: 4 PAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 183
P +AFPR+NN+S+ +ENG GTG T+YPPLS +H VDL IF
Sbjct: 117 PDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFG 176
Query: 184 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 363
LHL+GISS +L LF AV ITA A AIT+L
Sbjct: 177 LHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITML 236
Query: 364 LTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LTDRNLNTSF++ AGGGD ILYQHLF F GHPEVYI
Sbjct: 237 LTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYI 272
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 142 bits (344), Expect = 3e-33
Identities = 69/157 (43%), Positives = 92/157 (58%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+S+ ++ GAG G T YPP+S+ R+VD AIF
Sbjct: 195 APDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIF 254
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
++H++G SS + ++PLF +V +TA+ AGAIT+
Sbjct: 255 AVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITM 314
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LLTDRN T+FFDPAGGGDPIL+QH+F F GHPEVYI
Sbjct: 315 LLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYI 351
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 138 bits (334), Expect = 6e-32
Identities = 68/153 (44%), Positives = 90/153 (58%)
Frame = +1
Query: 13 AFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 192
AFPRINN++F ++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
+G+SS + +LPLFV +V ITA A +T+LL D
Sbjct: 171 SGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMD 230
Query: 373 RNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
RN NTSFF +GGGDP+LY+H+F F GHPEVYI
Sbjct: 231 RNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYI 263
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 138 bits (334), Expect = 6e-32
Identities = 68/153 (44%), Positives = 90/153 (58%)
Frame = +1
Query: 13 AFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 192
AFPRINN++F ++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
+G+SS + +LPLFV +V ITA A +T+LL D
Sbjct: 171 SGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMD 230
Query: 373 RNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
RN NTSFF +GGGDP+LY+H+F F GHPEVYI
Sbjct: 231 RNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYI 263
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 138 bits (333), Expect = 8e-32
Identities = 74/147 (50%), Positives = 86/147 (58%)
Frame = +1
Query: 13 AFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 192
AFPRINNI+F VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 94 AFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHL 153
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
ISS + +LPLFV ++ ITAF + IT+LL D
Sbjct: 154 TSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLD 213
Query: 373 RNLNTSFFDPAGGGDPILYQHLF*FXG 453
RN NTSFF+ +GGGDPILY+HLF F G
Sbjct: 214 RNFNTSFFEVSGGGDPILYEHLFWFFG 240
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 136 bits (330), Expect = 2e-31
Identities = 77/161 (47%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVE----NGAGTG*TVYPPLSSNIAHRGRSVD 168
AP +AFPR+NNISF V NGAGTG TVY PLS++ G +VD
Sbjct: 129 APDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVD 187
Query: 169 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 348
+AI SLH+AG SS + ++PLFV +V +TAF A
Sbjct: 188 MAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAA 247
Query: 349 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
AIT+LLTDRN T+F+D AGGGDP LYQHLF F GHPEVYI
Sbjct: 248 AITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYI 288
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 134 bits (324), Expect = 9e-31
Identities = 72/147 (48%), Positives = 84/147 (57%)
Frame = +1
Query: 13 AFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 192
AFPRINNI F VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 94 AFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHM 153
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
ISS + +LPLFV A+ ITA + +T+LL D
Sbjct: 154 TSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLD 213
Query: 373 RNLNTSFFDPAGGGDPILYQHLF*FXG 453
RN NTSFF+ AGGGDPILY+HLF F G
Sbjct: 214 RNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 124 bits (299), Expect = 1e-27
Identities = 69/157 (43%), Positives = 84/157 (53%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
A +AF R+NNISF VE GAGTG TVY PL+ +H G +VDLAIF
Sbjct: 95 ASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIF 154
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHL+G SS ++ +PLF AV TA A +T+
Sbjct: 155 SLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTM 214
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+ DRN NTSFF+ AGGGD +LYQHLF + HPEV I
Sbjct: 215 GIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKI 251
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 124 bits (299), Expect = 1e-27
Identities = 71/160 (44%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Frame = +1
Query: 4 PAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TV----YPPLSSNIAHRGRSVDL 171
P +AFPR+NNISF +E G GTG T+ YPPLS +H G SVDL
Sbjct: 119 PDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDL 178
Query: 172 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 351
AIF+LHL+G+SS +L LF +
Sbjct: 179 AIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALF-------GWATWSSRSRYFLG 231
Query: 352 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
IT++LTDRN NTSFF+ AGGGDPIL+QHLF F GHPEVYI
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYI 271
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 124 bits (299), Expect = 1e-27
Identities = 62/147 (42%), Positives = 84/147 (57%)
Frame = +1
Query: 13 AFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 192
AFPRINN++F ++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
+G+SS + +LPLFV +V ITA A +T+LL D
Sbjct: 171 SGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMD 230
Query: 373 RNLNTSFFDPAGGGDPILYQHLF*FXG 453
RN NTSFF +GGGDP+LY+H+F F G
Sbjct: 231 RNFNTSFFVVSGGGDPLLYEHIFWFFG 257
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 122 bits (294), Expect = 4e-27
Identities = 68/134 (50%), Positives = 76/134 (56%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF +E GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 78 APDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIF 137
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
SLHLAGISS S Q PLFV AV ITA A IT+
Sbjct: 138 SLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITM 197
Query: 361 LLTDRNLNTSFFDP 402
LLTDRNLNT+FFDP
Sbjct: 198 LLTDRNLNTTFFDP 211
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 121 bits (292), Expect = 7e-27
Identities = 60/143 (41%), Positives = 82/143 (57%)
Frame = +1
Query: 13 AFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 192
AFPRINN++F ++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
+G+SS + +LPLFV +V ITA A +T+LL D
Sbjct: 171 SGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMD 230
Query: 373 RNLNTSFFDPAGGGDPILYQHLF 441
RN NTSFF +GGGDP+LY+H+F
Sbjct: 231 RNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 114 bits (274), Expect = 1e-24
Identities = 62/156 (39%), Positives = 77/156 (49%)
Frame = +1
Query: 4 PAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 183
P + FPR+NN+SF E G G G T+YP L H + D +F+
Sbjct: 93 PDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFA 152
Query: 184 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 363
+HL GISS SF LF+ A ITA AG +T++
Sbjct: 153 VHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLI 212
Query: 364 LTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
L DRN NTSF+D GGGD IL+QH+F F GHPEVYI
Sbjct: 213 LCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYI 248
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 111 bits (267), Expect = 7e-24
Identities = 59/157 (37%), Positives = 76/157 (48%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+N +SF + G G+ T YPPLS S+D I
Sbjct: 100 APEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMIL 158
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
LH GI S + DQ+ +FV +T+F AG++
Sbjct: 159 GLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLF 218
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LL DRN NTSF+D GG+P+LYQHLF F GHPEVY+
Sbjct: 219 LLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYV 255
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 109 bits (263), Expect = 2e-23
Identities = 59/155 (38%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
++ PR+NN+S G G G T+YPPLS++ G +DLA+FSLH
Sbjct: 94 LSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLH 153
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXAGAITILL 366
+AG+SS F L P+ + + T+ A +T+LL
Sbjct: 154 MAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTLLL 213
Query: 367 TDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR+ +TSF+ P GGGDPIL+QHLF F GHPEVYI
Sbjct: 214 LDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYI 248
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 103 bits (246), Expect = 3e-21
Identities = 57/158 (36%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGR-SVDLAI 177
+P +A+PRIN+IS E G GTG T+YPPLS+++ +VD+ I
Sbjct: 94 SPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVII 153
Query: 178 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 357
F L ++G++S + L + ++ IT+ G +
Sbjct: 154 FGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVL 213
Query: 358 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+LL+D + NT FFDP GDPILYQHLF F GHPEVYI
Sbjct: 214 MLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYI 251
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 96.3 bits (229), Expect = 3e-19
Identities = 50/154 (32%), Positives = 75/154 (48%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+ +PR+N S +E G+GTG T+YPPLS+++++ G +D IF L
Sbjct: 100 VVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLL 157
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
AGI+S D++ ++ +T+F ++
Sbjct: 158 AAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFL 217
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR+ NT FF+ + GDP+LYQHLF F GHPEVYI
Sbjct: 218 DRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYI 251
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 94.7 bits (225), Expect = 9e-19
Identities = 55/125 (44%), Positives = 66/125 (52%)
Frame = +1
Query: 97 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 276
G G G T+YPPLS G VD +FSLHLAG+SS S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS--- 272
Query: 277 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGH 456
+ V A T+ A IT+LL DRN T+FF+P+GGGDPIL+QHLF F GH
Sbjct: 273 --IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGH 330
Query: 457 PEVYI 471
PEVY+
Sbjct: 331 PEVYV 335
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 92.3 bits (219), Expect = 5e-18
Identities = 57/156 (36%), Positives = 76/156 (48%)
Frame = +1
Query: 4 PAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 183
P + FPR+N +SF A G T YPPLSS SV+ ++FS
Sbjct: 85 PDLLFPRMNALSFWLMPFSLSLLLFSM-----ASAGWTFYPPLSS----LSPSVEFSVFS 135
Query: 184 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 363
LHLAGI+S + L LF ++ + + A IT++
Sbjct: 136 LHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGITLI 193
Query: 364 LTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
LTD++L T F+D GGDP+LYQHLF F GHPEVY+
Sbjct: 194 LTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYV 229
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 90.6 bits (215), Expect = 1e-17
Identities = 52/116 (44%), Positives = 60/116 (51%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NNISF VE GAGTG TVYPPLS +H G SVDLAIF
Sbjct: 89 APDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIF 148
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 348
SLHL+GISS + +LPLFV A+ +TA AG
Sbjct: 149 SLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 86.6 bits (205), Expect = 2e-16
Identities = 51/154 (33%), Positives = 70/154 (45%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
IAFPR+N S+ V+ G G Y PLS G+ D+ +
Sbjct: 108 IAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMIT 167
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
+S+ S D++PLFV ++ +T+F A T L+
Sbjct: 168 FTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLIL 227
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR + T FF+PA GGD +L+QHLF F GHPEVYI
Sbjct: 228 DRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYI 261
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 86.6 bits (205), Expect = 2e-16
Identities = 53/160 (33%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSL 186
+AFPR+N SF G AG G T Y PLS+N+ G L + ++
Sbjct: 124 MAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAI 183
Query: 187 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILL 366
+ G+SS ++ +LPL + + +TA A +LL
Sbjct: 184 FVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLL 243
Query: 367 TDRNLNTSFFDPA-----GGGDPILYQHLF*FXGHPEVYI 471
DR+ T FF GGGDPIL+QHLF GHPEVYI
Sbjct: 244 LDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYI 283
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 84.2 bits (199), Expect = 1e-15
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Frame = +1
Query: 10 IAFPRINNISF-XXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFS 183
++ PR+N ISF + +G T+YPPLS+ A G ++DL++
Sbjct: 102 LSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLV 161
Query: 184 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 363
+H+ GISS +F + ++ ++ +T+ AIT L
Sbjct: 162 VHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAITGL 221
Query: 364 LTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
L DRN+N++ +D G DP+LYQHLF F GHPEVY+
Sbjct: 222 LLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYV 255
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 81.0 bits (191), Expect = 1e-14
Identities = 50/157 (31%), Positives = 70/157 (44%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
A +AFPR+N +S+ N T T YPP S N + L +F
Sbjct: 47 AKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVF 104
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
+HL G SS +F + LFV + AGA+T+
Sbjct: 105 VMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTM 164
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
L D+ L T+FF+PA GGDP++YQ++F F HP VY+
Sbjct: 165 LFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYV 201
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 79.4 bits (187), Expect = 4e-14
Identities = 48/154 (31%), Positives = 64/154 (41%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFPR+N+ F + G Y PLSS + VD I L
Sbjct: 111 VAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLL 170
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
+ GI S S ++PLFV + + A A+ +LL
Sbjct: 171 IMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLI 230
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR L ++FFDP GG +L+QH F GHPEVYI
Sbjct: 231 DRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYI 264
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 79.4 bits (187), Expect = 4e-14
Identities = 53/154 (34%), Positives = 66/154 (42%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFPR+N ++F V G T YPPLS G +L I SL
Sbjct: 106 MAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLL 162
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
L G SS +PLF A+ T+ A A+ +L
Sbjct: 163 LVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSF 222
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
D TSFF+P GGGDP++YQHLF F HP VYI
Sbjct: 223 DLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYI 256
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 77.8 bits (183), Expect = 1e-13
Identities = 54/149 (36%), Positives = 64/149 (42%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +A PR+ N+SF + G G VYPP SS +AH +VDL IF
Sbjct: 79 APXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIF 138
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
LHLAGISS ++ LF A AIT+
Sbjct: 139 XLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITM 198
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*F 447
L R N SFF P G P + F F
Sbjct: 199 LXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 77.4 bits (182), Expect = 1e-13
Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 3/160 (1%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENG-AGTG*TVYPPLS--SNIAHRGRSVDL 171
AP +AFP++N +F G A +G YPP+S + + H L
Sbjct: 112 APDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFL 171
Query: 172 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 351
I ++ L+GISS F ++P+FV G
Sbjct: 172 WILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGG 231
Query: 352 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+LL D + TSFF P GGGDP+L+QH F F HP VY+
Sbjct: 232 AVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYV 271
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 76.6 bits (180), Expect = 3e-13
Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSL 186
+AFPR+N +S+ E+GA G T+Y PL++ I G +DLA ++
Sbjct: 100 LAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAI 159
Query: 187 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILL 366
L +S + ++P+F ++ T +LL
Sbjct: 160 FLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGGALLL 219
Query: 367 TDRNLNTSFF-DPAGGGDPILYQHLF*FXGHPEVYI 471
DRNL T FF +PAGG +L+ HLF F GHPEVYI
Sbjct: 220 LDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYI 253
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 76.2 bits (179), Expect = 3e-13
Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVEN--GAGTG*TVYPPLSSNIAHRGRSVDLA 174
A +AFPRIN I+F + A T T+Y PLS ++ +VD+
Sbjct: 144 ADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMM 201
Query: 175 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 354
+ LHL G+S+ + L +F + + A+
Sbjct: 202 MLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGSAL 261
Query: 355 TILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+LL DRN T+FF AGG DPI +QHLF F GHPEVY+
Sbjct: 262 IMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYV 299
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 74.5 bits (175), Expect = 1e-12
Identities = 48/154 (31%), Positives = 63/154 (40%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFPR+N +S V G Y PL+ VD I +
Sbjct: 110 MAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIG 169
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
L G++S + +++PLFV + AF A LL
Sbjct: 170 LTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLF 229
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR+ T FF P GGD +L+QHLF F GHPEVYI
Sbjct: 230 DRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYI 263
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 73.7 bits (173), Expect = 2e-12
Identities = 47/158 (29%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGT-G*TVYPPLSSNIAHRGRSVDLAI 177
AP +AFPR+N F GA G T+Y PLS I G D+ I
Sbjct: 114 APDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWI 173
Query: 178 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 357
+ GI S + ++P+F + + + A
Sbjct: 174 VGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAAL 233
Query: 358 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+L DR L +DPA GG +L+QHLF F GHPEVY+
Sbjct: 234 GVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYV 270
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 73.3 bits (172), Expect = 2e-12
Identities = 51/158 (32%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
A +AFPR+N +S + G TG T Y P S AH +V +F
Sbjct: 119 AKDVAFPRLNLLSLYIYLAGAVLALWGM-LNGGLDTGWTFYTPYS---AHTTTTVAPVLF 174
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
+ G SS ++ ++PLFV A+ T+ G + +
Sbjct: 175 GAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATSCIQVLATPVI-GLLLV 233
Query: 361 LLTDRNL-NTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
L+T NL FDPA GGDP+L+QHLF F HP VYI
Sbjct: 234 LVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYI 271
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 73.3 bits (172), Expect = 2e-12
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 6/163 (3%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXV-ENGAGTG*TVYPPLSSNIAHRGRSVDLAI 177
AP + +PRIN +SF ++G G T+YPPLS+ + VDL +
Sbjct: 95 APDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--ISKSIGVDLIL 152
Query: 178 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 357
+ +AG SS + LF +V + A
Sbjct: 153 LGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTALPPLAAGAI 212
Query: 358 ILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FXGHPEVYI 471
+LL +R+L FF DPA GDP L+QH+F F GHPEVYI
Sbjct: 213 MLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYI 255
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.3 bits (172), Expect = 2e-12
Identities = 59/165 (35%), Positives = 73/165 (44%), Gaps = 8/165 (4%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENG---AGTG*TVYPPLS-----SNIAHRG 156
A +AFPRIN I+F A TG T+Y PLS N A+ G
Sbjct: 170 ADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG 229
Query: 157 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 336
VDL + LHL+G+S+ S+ L +F + +
Sbjct: 230 --VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFP 287
Query: 337 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
AI +LL DRN TSFF AG G IL+QHLF F GHPEVYI
Sbjct: 288 LLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYI 330
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 72.9 bits (171), Expect = 3e-12
Identities = 36/61 (59%), Positives = 40/61 (65%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF VENGAGTG TVYPPLSS AH G SVDLAI+
Sbjct: 5 APDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIY 64
Query: 181 S 183
S
Sbjct: 65 S 65
Score = 55.2 bits (127), Expect = 7e-07
Identities = 28/56 (50%), Positives = 31/56 (55%)
Frame = +3
Query: 288 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFXT 455
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIF T
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 72.5 bits (170), Expect = 4e-12
Identities = 47/157 (29%), Positives = 66/157 (42%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
A +AFP++N +SF V+ GA TG T Y P S+ + V L F
Sbjct: 112 AKDVAFPKLNLLSFYVYLAGAVVALFGM-VQGGADTGWTFYTPYSTTTITKVVPVLLGAF 170
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 360
L G SS + +LPLFV ++ T+ ++ +
Sbjct: 171 IL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLL 227
Query: 361 LLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+ + FDPA GGDP+L+QH F F HP VYI
Sbjct: 228 VAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYI 264
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 4e-12
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 127 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 306
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 307 TAFXXXXXXXXXAGAITILLTDR 375
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 69.7 bits (163), Expect = 3e-11
Identities = 43/116 (37%), Positives = 56/116 (48%)
Frame = +1
Query: 124 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 303
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 304 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYV 247
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 66.9 bits (156), Expect = 2e-10
Identities = 42/154 (27%), Positives = 60/154 (38%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFP +NN+SF + G T Y PL+SN G + + L
Sbjct: 132 VAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQ 191
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
+AGI + + ++P+F IT A+ +L
Sbjct: 192 IAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSF 251
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR FF GG P+L+ +LF GHPEVYI
Sbjct: 252 DRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYI 285
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 66.9 bits (156), Expect = 2e-10
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +1
Query: 109 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 279
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 280 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHP 459
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF F GHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 460 EVYI 471
EVY+
Sbjct: 403 EVYV 406
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 66.1 bits (154), Expect = 4e-10
Identities = 43/154 (27%), Positives = 62/154 (40%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFP +N++SF V N A TG YPPL+ VD I++L
Sbjct: 137 VAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQ 196
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
++GI + +P+F GA+ +L
Sbjct: 197 ISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSFPILTGALAMLAL 256
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR L+ FF GG+ ++Y +LF GHPEVYI
Sbjct: 257 DRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYI 290
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 66.1 bits (154), Expect = 4e-10
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 1/155 (0%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSL 186
+A PR+N S+ GA G T Y P S A VD + ++
Sbjct: 104 VALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAI 160
Query: 187 HLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILL 366
L G SS S ++P++V +V + A ++L
Sbjct: 161 LLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVL 220
Query: 367 TDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+R + S+F+PA GGDP+L+Q F F HP VY+
Sbjct: 221 LERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYV 255
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 65.7 bits (153), Expect = 5e-10
Identities = 42/154 (27%), Positives = 61/154 (39%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+ FPR+ + + G +Y PLS++ G S D + +
Sbjct: 134 LVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWLIGIT 193
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
LA I+S S ++P+ + + TAF +L
Sbjct: 194 LAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEA 253
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+R L FFD GGDP+L+QHLF GHPEVYI
Sbjct: 254 ERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYI 287
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 65.3 bits (152), Expect = 6e-10
Identities = 51/172 (29%), Positives = 72/172 (41%), Gaps = 15/172 (8%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVE-NGAGTG*TVYPPLS---SNIAHRGRSVD 168
A +AFP +N +S+ + +GA G T YPPLS ++ G +
Sbjct: 123 ADDMAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQT 182
Query: 169 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 348
L + + G+SS + +LPL + A+ ITA
Sbjct: 183 LWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTA 242
Query: 349 AITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FXGHPEVYI 471
A ++L DR + T FF P AGGG P+L+QHLF F HP VYI
Sbjct: 243 AGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYI 294
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 64.9 bits (151), Expect = 8e-10
Identities = 43/154 (27%), Positives = 61/154 (39%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFPR+ S+ + G Y PL+S G ++D+ +
Sbjct: 128 MAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGLGMI 187
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
L GIS+ S D+LP+ V + + A +L
Sbjct: 188 LLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWL 247
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DRN T FFD A GG P+L+QHLF HP VY+
Sbjct: 248 DRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYV 281
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 64.9 bits (151), Expect = 8e-10
Identities = 42/154 (27%), Positives = 61/154 (39%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFP +N++SF V A TG YPPL+ G VD I++L
Sbjct: 136 VAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQ 195
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
L+G+ + +P+F A+ +L
Sbjct: 196 LSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTV 255
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR L+ F GG+P++Y +LF GHPEVYI
Sbjct: 256 DRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYI 289
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 64.1 bits (149), Expect = 1e-09
Identities = 44/154 (28%), Positives = 60/154 (38%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+ FPR+N + + G YPPL+ G +D +
Sbjct: 115 MTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTTVVT 174
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
IS+ S +++P+FV AV + +F A +L
Sbjct: 175 FMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLAL 234
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR FF A GDPIL+QHLF F GHPEVYI
Sbjct: 235 DRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYI 267
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 64.1 bits (149), Expect = 1e-09
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
A +AFPR+N +S + + T YPP S I H + F
Sbjct: 92 AKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTF 148
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AIT 357
S+ L G +S +++L +FV A + AF G A+T
Sbjct: 149 SVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVT 207
Query: 358 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+L D+ + T FFD A GGD + YQ+LF F HP VY+
Sbjct: 208 MLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYV 245
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 63.3 bits (147), Expect = 3e-09
Identities = 41/154 (26%), Positives = 59/154 (38%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFPR+ F +G +YPPLSS + G + D + +
Sbjct: 108 LAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLIGIT 167
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
IS+ S ++P+F +TA +L
Sbjct: 168 FVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSILLEL 227
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+R + FF A GGD +L+QHLF GHPEVYI
Sbjct: 228 ERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYI 261
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 63.3 bits (147), Expect = 3e-09
Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Frame = +1
Query: 25 INNISFXXXXXXXXXXXXXXXVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHL 192
+N +S+ +E G +G +YPPLS+ ++ G + + + S+ L
Sbjct: 145 MNMLSYWFFFGSSVIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMAL 204
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
IS SF +LPL + A ITA A +L+ D
Sbjct: 205 FIISVLLGGINYITTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFD 264
Query: 373 RNLNTSFFDP----AG------GGDPILYQHLF*FXGHPEVYI 471
R+L TSFF AG GG P+L+QHLF F GHPEVYI
Sbjct: 265 RSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYI 307
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 63.3 bits (147), Expect = 3e-09
Identities = 35/154 (22%), Positives = 64/154 (41%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
++FP +N + F + G T Y LS + +G +D + L
Sbjct: 103 VSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQ 160
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
++G+ + ++ +LPLF + + + +++
Sbjct: 161 ISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMML 220
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR T+FF+P GG+ ++++HLF GHPEVYI
Sbjct: 221 DRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYI 254
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 60.5 bits (140), Expect = 2e-08
Identities = 39/154 (25%), Positives = 60/154 (38%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+A+PR++ F +G +YPPL+S + G + D + +
Sbjct: 108 LAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLLGIT 167
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
IS+ S D++P++ +TA +L
Sbjct: 168 FVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSILLEL 227
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+R FF A GGD +L+QHLF GHPEVYI
Sbjct: 228 ERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYI 261
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 60.5 bits (140), Expect = 2e-08
Identities = 40/154 (25%), Positives = 60/154 (38%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+ FPR++ + + G +YPPL+ G + D + +
Sbjct: 118 LPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFWLLGIG 177
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
IS+ S ++P+F A+ I A A +L
Sbjct: 178 FIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEI 237
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+R+ FF GGDP+L+QHLF F GHPEVYI
Sbjct: 238 ERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYI 271
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 60.5 bits (140), Expect = 2e-08
Identities = 51/168 (30%), Positives = 68/168 (40%), Gaps = 14/168 (8%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIF 180
+ FP +N +S+ V G G G T+YPP + S + + L +
Sbjct: 119 MVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLS 178
Query: 181 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAIT 357
SL L I + +LPL V + T G++
Sbjct: 179 SLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVM 238
Query: 358 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FXGHPEVYI 471
+LL DR L TSFF P GGG P+L+QHLF F GHPEVYI
Sbjct: 239 LLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYI 285
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 58.8 bits (136), Expect = 6e-08
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1
Query: 376 NLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
N T+FFDPAGGGD IL+QHLF F GHPEVYI
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYI 222
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.8 bits (136), Expect = 6e-08
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +1
Query: 88 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 207
VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 13 VEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 58.8 bits (136), Expect = 6e-08
Identities = 44/153 (28%), Positives = 61/153 (39%), Gaps = 1/153 (0%)
Frame = +1
Query: 16 FPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLS-SNIAHRGRSVDLAIFSLHL 192
+P+IN +SF + G +Y PLS + G +L +L L
Sbjct: 94 WPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVNYGLGTNLIQIALIL 152
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
+G+SS + ++PLFV TA + +
Sbjct: 153 SGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLE 210
Query: 373 RNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
R T FFD A GG P+L+Q LF F GHPEVYI
Sbjct: 211 RLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYI 243
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 58.4 bits (135), Expect = 7e-08
Identities = 39/154 (25%), Positives = 61/154 (39%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+ FPR++ +F V G + PPL++ G + D + +
Sbjct: 177 LPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGYNADFWLLGIG 236
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
IS+ + ++P+F A+ + A A +L
Sbjct: 237 FIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPAVILATALLEL 296
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+R + FF GGDP+L+QHLF F GHPEVYI
Sbjct: 297 ERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYI 330
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 54.4 bits (125), Expect = 1e-06
Identities = 41/154 (26%), Positives = 57/154 (37%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFP +N+IS V + G YPP + + + G VD I+SL
Sbjct: 156 VAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNPGIGVDYWIWSLT 215
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
LA + S +PLF TA L
Sbjct: 216 LASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAMPPLTVVTLQLAL 275
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR L+ FF GG+ + + ++F GHPEVYI
Sbjct: 276 DRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYI 309
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 54.0 bits (124), Expect = 2e-06
Identities = 41/158 (25%), Positives = 59/158 (37%), Gaps = 4/158 (2%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAG----TG*TVYPPLSSNIAHRGRSVDLAI 177
+AFPR+N S+ + G G Y L+S G D
Sbjct: 108 VAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGPDFWT 167
Query: 178 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 357
L L GI + + ++P+FV +T+ A+
Sbjct: 168 LGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALI 227
Query: 358 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+L+ DR +FF+ GG + YQHLF GHPEVYI
Sbjct: 228 MLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYI 265
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 54.0 bits (124), Expect = 2e-06
Identities = 36/154 (23%), Positives = 58/154 (37%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+ FPR++ + + +G +YPPL++ G D+ + L
Sbjct: 136 LPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGLGSDIWLLGLS 193
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
++S + +PL+ V + +
Sbjct: 194 FIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPPLIAGDLLFEM 253
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+R + FFDP GGDP+L+QHLF GHPEVYI
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYI 287
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 53.6 bits (123), Expect = 2e-06
Identities = 38/154 (24%), Positives = 59/154 (38%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFP +N +SF + A TG YPPLS VD +S+
Sbjct: 131 VAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQ 190
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
++GI + F+++ +F+ + + +
Sbjct: 191 ISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISFPILTILLFQIFL 250
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
DR L+T F+ GG +LY +L GHPEVYI
Sbjct: 251 DRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYI 284
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 53.2 bits (122), Expect = 3e-06
Identities = 49/173 (28%), Positives = 69/173 (39%), Gaps = 16/173 (9%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAG-TG*TVYPPLSS--NIAHRGRSVDL 171
A +AFPR N +SF + +G +G T Y LS+ A G +
Sbjct: 121 AEDMAFPRFNMMSFWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQ 180
Query: 172 AIFSLHLA--GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 345
++ + +A I+S S ++P+ A IT+
Sbjct: 181 TLWGISIAIFCIASLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLL 240
Query: 346 GAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FXGHPEVYI 471
A +L DR TSFF P+G GG +L+QHLF F GHPEVYI
Sbjct: 241 PACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYI 293
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 51.6 bits (118), Expect = 8e-06
Identities = 43/171 (25%), Positives = 62/171 (36%), Gaps = 14/171 (8%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYP---PLSSNIAHRGRSVDL 171
A +AFP++N +S+ G G T YP L+ G +
Sbjct: 127 ADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTY 186
Query: 172 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 351
+ + G SS +F +LP+ + + ITA
Sbjct: 187 WLLGVTFVGFSSMMGSINYMTTIINMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAG 246
Query: 352 ITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FXGHPEVYI 471
+ + DR T FF P+G GG P+L+QHLF F HP VYI
Sbjct: 247 GFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQPLLWQHLFWFYSHPAVYI 297
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 51.6 bits (118), Expect = 8e-06
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FX 450
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 451 GHPEV 465
GH +V
Sbjct: 72 GHTDV 76
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 50.0 bits (114), Expect = 3e-05
Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 1/153 (0%)
Frame = +1
Query: 16 FPRINNISFXXXXXXXXXXXXXXXVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 192
+PR+N + + + G TG TVY PLSS D A ++ L
Sbjct: 123 YPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPYLGADTAAAAVVL 182
Query: 193 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 372
GI + LPLFV AV A G +LL
Sbjct: 183 RGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVG 242
Query: 373 RNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
++ S++ GG +++++LF + GHPEVY+
Sbjct: 243 NLMHASYYISNYGG-ALMWENLFWYFGHPEVYL 274
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 49.2 bits (112), Expect = 5e-05
Identities = 35/154 (22%), Positives = 54/154 (35%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+A PR+N + G T Y PL+ + G SV + L+
Sbjct: 112 VALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMVAVILN 171
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
G+ S ++P+F ++ T+ A +
Sbjct: 172 --GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALLTYL 229
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVYI 471
+ L S F+P GG P+LYQ F F HP VY+
Sbjct: 230 EIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYV 263
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 8e-05
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 291 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 443
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLS 135
AP +AFPR+NN+SF VE GAGTG TVYPPL+
Sbjct: 90 APDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 47.6 bits (108), Expect = 1e-04
Identities = 34/128 (26%), Positives = 43/128 (33%)
Frame = +3
Query: 3 TSYSIPTXK*YKLLTPTPLPYIINFKXXCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFF 182
TS+ P K +K+L TPL Y N C K C + +NSLP Y T R +F
Sbjct: 74 TSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFC 133
Query: 183 TTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNI 362
T CM +YS + S+YNI
Sbjct: 134 PTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNI 193
Query: 363 INRSKLKY 386
K KY
Sbjct: 194 TYWPKPKY 201
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 46.4 bits (105), Expect = 3e-04
Identities = 35/153 (22%), Positives = 56/153 (36%)
Frame = +1
Query: 10 IAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 189
+AFP +N + V + + G PL+ G VD ++++
Sbjct: 155 MAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSPGVGVDYWMWAIQ 214
Query: 190 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 369
+ + + ++ +LP V T A+ +L
Sbjct: 215 IGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAFPILGVALAMLGA 274
Query: 370 DRNLNTSFFDPAGGGDPILYQHLF*FXGHPEVY 468
DR L T FF GG+ +LY +LF GHPEVY
Sbjct: 275 DRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVY 307
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 46.4 bits (105), Expect = 3e-04
Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 13/170 (7%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSN--IAHRGRSVDLA 174
A +AFPR+N +S+ G T+Y PL++ I G
Sbjct: 98 ADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIPGEGLGATSV 157
Query: 175 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 354
+ +L + + +P+F ++ +T + A+
Sbjct: 158 VLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLFAFAALLAAL 217
Query: 355 TILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FXGHPEVYI 471
IL +D L T++F D G +L+ HLF F GHPEVYI
Sbjct: 218 MILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYI 267
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 43.2 bits (97), Expect = 0.003
Identities = 29/69 (42%), Positives = 35/69 (50%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 180
AP +AFPR+NN+SF V+ G + PL G SVDLAIF
Sbjct: 73 APDMAFPRMNNMSFGFFPLHWHYYSFFT-VKGGLARD-ELSTPLYLVTISAGPSVDLAIF 130
Query: 181 SLHLAGISS 207
LHLAG+SS
Sbjct: 131 PLHLAGVSS 139
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.021
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 154 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 333
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 334 XXXAGAITILLTDRNLNT 387
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 40.3 bits (90), Expect = 0.021
Identities = 23/48 (47%), Positives = 25/48 (52%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNI 144
AP +AFPR+NNISF VE GAGTG TV LS I
Sbjct: 89 APDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 38.7 bits (86), Expect = 0.064
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +3
Query: 375 KLKYIIF*SCWRRRPNFISTFILIFXTS*SLY 470
K KYIIF S W F+STFILIF T SLY
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLY 38
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 33.5 bits (73), Expect = 2.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TV 120
+P +AFPR+NNISF VE G G+G TV
Sbjct: 93 SPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 33.1 bits (72), Expect = 3.2
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TVYPPLSSNI 144
A +AF R+NNISF VE GAGTG TV SS +
Sbjct: 95 ASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 4.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 374 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 252
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 4.2
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 428 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 291
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1;
Bohadschia argus|Rep: Cytochrome oxidase subunit I -
Bohadschia argus
Length = 247
Score = 31.5 bits (68), Expect = 9.7
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +3
Query: 9 YSIPTXK*YKLLTPTPLPYIINFKXXCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 188
Y IP + +LL L + K CRNRMN+LP R + YFF+T
Sbjct: 42 YGIPPNEQNELLVSPSLFHSTPSISSSGKSCRNRMNNLPTLIQNNSPRRSVSSPRYFFST 101
Query: 189 FS 194
S
Sbjct: 102 SS 103
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 31.5 bits (68), Expect = 9.7
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 1 APAIAFPRINNISFXXXXXXXXXXXXXXXVENGAGTG*TV 120
A ++F R+NNISF VE+GAGTG TV
Sbjct: 90 ASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,839,255
Number of Sequences: 1657284
Number of extensions: 5906552
Number of successful extensions: 14107
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 12778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13914
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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