Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M11
(833 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 85 9e-19
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 23 3.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 3.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 3.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 3.0
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 3.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.1
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 9.1
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 21 9.1
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 84.6 bits (200), Expect = 9e-19
Identities = 45/142 (31%), Positives = 84/142 (59%), Gaps = 9/142 (6%)
Frame = +3
Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
FE L+ LL + + G+ KP+ IQ+ +IP+ LSG+D+++ A+ G+GKT A+ +P++
Sbjct: 160 FETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIHN 219
Query: 612 V-------DPKKDTIQALIVV--PTXELALQTSQICIELAKHTDIRVMVTTGGTNLRXDI 764
+ + + + Q ++V+ PT ELA+Q + + A ++ ++V V GGT+
Sbjct: 220 LLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNSTVKVAVIYGGTSTNHQR 279
Query: 765 MRIYQNVQVIIATPGRMIDLMD 830
RI +++ATPGR+ D ++
Sbjct: 280 GRILGGCHILVATPGRLKDFVN 301
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 87 LKKVTTLDTQRRHHQEFTQ 31
+KK TT TQ +H+ ++ Q
Sbjct: 245 MKKYTTRSTQAKHYVQYDQ 263
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 87 LKKVTTLDTQRRHHQEFTQ 31
+KK TT TQ +H+ ++ Q
Sbjct: 559 MKKYTTRSTQAKHYVQYDQ 577
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 87 LKKVTTLDTQRRHHQEFTQ 31
+KK TT TQ +H+ ++ Q
Sbjct: 792 MKKYTTRSTQAKHYVQYDQ 810
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 87 LKKVTTLDTQRRHHQEFTQ 31
+KK TT TQ +H+ ++ Q
Sbjct: 792 MKKYTTRSTQAKHYVQYDQ 810
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 372 IPPKDRRIKTSDVTDTRGNEFEEFCLKR 455
I K R ++ D+ GN EEF L R
Sbjct: 185 ISDKAARPRSLQFVDSEGNILEEFVLSR 212
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 132 SLSRSPSISE*LDXNLKKVTTLDTQRRHHQEFTQ 31
SL R ++ + D +KK TT ++ RH+ ++ Q
Sbjct: 806 SLFRGKALMD--DNVMKKYTTSSSEARHYVQYDQ 837
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 132 SLSRSPSISE*LDXNLKKVTTLDTQRRHHQEFTQ 31
SL R ++ + D +KK TT ++ RH+ ++ Q
Sbjct: 806 SLFRGKALMD--DNVMKKYTTSSSEARHYVQYDQ 837
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 132 SLSRSPSISE*LDXNLKKVTTLDTQRRHHQEFTQ 31
SL R ++ + D +KK TT ++ RH+ ++ Q
Sbjct: 806 SLFRGKALMD--DNVMKKYTTSSSEARHYVQYDQ 837
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 132 SLSRSPSISE*LDXNLKKVTTLDTQRRHHQEFTQ 31
SL R ++ + D +KK TT ++ RH+ ++ Q
Sbjct: 806 SLFRGKALMD--DNVMKKYTTSSSEARHYVQYDQ 837
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 9.1
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 716 HSCNGYYR 739
H+CN YYR
Sbjct: 1113 HNCNAYYR 1120
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 227 LKLETYNHTNYYLSK 183
L+LE HTN+YL++
Sbjct: 236 LELEKEFHTNHYLTR 250
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 227 LKLETYNHTNYYLSK 183
L+LE HTN+YL++
Sbjct: 18 LELEKEFHTNHYLTR 32
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,569
Number of Sequences: 336
Number of extensions: 3400
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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