Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M11
         (833 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    97   6e-22
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    25   2.1  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    25   3.8  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    25   3.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   3.8  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    25   3.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.0  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   8.7  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 97.1 bits (231), Expect = 6e-22
 Identities = 48/140 (34%), Positives = 86/140 (61%), Gaps = 7/140 (5%)
 Frame = +3

Query: 432 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 611
           FE   L+ E++  + +  + KP+PIQ  +IPI L+G+D++A A+ G+GKT A+ +P++  
Sbjct: 176 FERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHH 235

Query: 612 VDPKKDTIQ-------ALIVVPTXELALQTSQICIELAKHTDIRVMVTTGGTNLRXDIMR 770
           +  K+D+++        +IV PT ELA+Q      + A  T ++V V+ GGT ++  +  
Sbjct: 236 LLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQL 295

Query: 771 IYQNVQVIIATPGRMIDLMD 830
           +     V++ATPGR++D +D
Sbjct: 296 MRGGCHVLVATPGRLLDFID 315


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
 Frame = -2

Query: 607 SKTGIQ*APVLPVPFLALASTSFPLRAIGIEAS*IGDGFSHPFSKIP------INNSRFK 446
           SKT    AP+LPV      S SFP      +     DG + P S IP        +S + 
Sbjct: 39  SKTKNASAPLLPVDRFVGFSISFP------QWGCFRDGIALPVSFIPSIAFPTFRSSWYI 92

Query: 445 QNSSNSLPLVSVTSLVFILL 386
           +   N  PL+  +SL  +LL
Sbjct: 93  KQIGNMSPLMFCSSLAMVLL 112


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1

Query: 830 IHEINHTPRCGNNHLYILINTHYIXSKVCASCSNH 726
           I  +N T R G+    IL  TH    K+CA    +
Sbjct: 139 ISMVNFTNRIGDETSSILTTTHTSVPKMCAKIGEY 173


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 716 HSCNGYYRRHKPSX*YNAYLSKCTSDY 796
           HSC     R+K S     Y +KC ++Y
Sbjct: 122 HSCRDVQGRYKDSCDKTFYSTKCLAEY 148


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 240 RDKFGKMMTENRISSSN 290
           R K G MMTEN+ S+ N
Sbjct: 224 RKKLGSMMTENKASTFN 240


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 716 HSCNGYYRRHKPSX*YNAYLSKCTSDY 796
           HSC     R+K S     Y +KC ++Y
Sbjct: 120 HSCRDVQGRYKDSCDKTFYSTKCLAEY 146


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 629 YYTSFNCCTNXRVGTPNITDLY*TGKTHRHSCNGYYRR 742
           YY  + C T     +P++   + TG+ H+ +   YY++
Sbjct: 4   YYCDY-CDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQK 40


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 493 SHLLFKRPQFLLP*VEKMYLQELRMELVKLVL 588
           +H L  +PQ  LP VE  Y +E + + ++  L
Sbjct: 546 THFLGYQPQMQLPHVEPFYRKEQQQQQLQQTL 577


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,671
Number of Sequences: 2352
Number of extensions: 13981
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)