Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M09
(846 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p ... 80 6e-14
UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4; n... 64 3e-09
UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep: Zgc:5... 61 3e-08
UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12... 61 4e-08
UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome a... 59 2e-07
UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole gen... 55 3e-06
UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep: F17... 52 2e-05
UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma j... 50 7e-05
UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RA... 49 2e-04
UniRef50_Q7RG55 Cluster: Arabidopsis thaliana F17L21.12-related;... 46 0.001
UniRef50_A5KBT3 Cluster: Ribosome associated membrane protein RA... 46 0.001
UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11; Liliopsida|... 46 0.002
UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2; ... 46 0.002
UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, wh... 44 0.004
UniRef50_Q5CPN8 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
>UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p -
Drosophila melanogaster (Fruit fly)
Length = 64
Score = 80.2 bits (189), Expect = 6e-14
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = +1
Query: 97 ASXNITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXLA 249
AS +TMRG+VPK+ K K QYPV PWLLALFIFVVCGSA+FQ +QSI A
Sbjct: 14 ASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIRAA 64
>UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4;
n=33; Eumetazoa|Rep: Ribosome-attached membrane protein
4 - Homo sapiens (Human)
Length = 66
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = +1
Query: 100 SXNITMRGHVPKT----PKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT RG+V KT P+EKA+ V PWLLALFIFVVCGSA+FQ IQSI +
Sbjct: 15 SKNITQRGNVAKTSRNAPEEKAS---VGPWLLALFIFVVCGSAIFQIIQSIRM 64
>UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep:
Zgc:56419 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 66
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Frame = +1
Query: 100 SXNITMRGHVPK----TPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT+RG+V K T +EKA V PWLLALF+FVVCGSA+FQ IQSI +
Sbjct: 15 SKNITLRGNVAKSTRGTQEEKAV---VGPWLLALFVFVVCGSAIFQIIQSIRM 64
>UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12.5;
n=2; Bilateria|Rep: Putative uncharacterized protein
T09A12.5 - Caenorhabditis elegans
Length = 63
Score = 60.9 bits (141), Expect = 4e-08
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +1
Query: 100 SXNITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSI 240
S N+T RG+VPK K +++P + WL+ LFIFVVCGSA+F+ I+ I
Sbjct: 15 SKNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYI 61
>UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome
attached membrane protein 4; n=1; Pan troglodytes|Rep:
PREDICTED: similar to ribosome attached membrane protein
4 - Pan troglodytes
Length = 231
Score = 58.8 bits (136), Expect = 2e-07
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +1
Query: 55 KWPLSSACVSPTRLASXNITMRGHVPK---TPKEKAAQYPVAPWLLALFIFVVCGSAVFQ 225
+W S V PTR + P+ P+EKA+ V PWLLALFIFVVCGSA+FQ
Sbjct: 166 RWSPSRGSVWPTRSTARTSPSAATSPRPRNAPEEKAS---VGPWLLALFIFVVCGSAIFQ 222
Query: 226 XIQSIXL 246
IQSI +
Sbjct: 223 IIQSIRM 229
>UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +1
Query: 106 NITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQS 237
NIT RG VP+T +K + YPV P LL F+FVV GS++FQ I++
Sbjct: 55 NITKRGSVPETTTKKGSDYPVGPVLLGFFVFVVIGSSLFQIIRT 98
>UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep:
F17L21.12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 77
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 106 NITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQS 237
NI RG VP+T +K YPV P LL F+FVV GS++FQ I++
Sbjct: 27 NILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRT 70
>UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02042 protein - Schistosoma
japonicum (Blood fluke)
Length = 79
Score = 50.0 bits (114), Expect = 7e-05
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +1
Query: 97 ASXNITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXLA 249
A N+ RG+VPK+ K +Q + +L L +FVVCGSAVF+ IQ I +A
Sbjct: 28 AHGNVVNRGNVPKSLKSSDSQSNMNACILGLIVFVVCGSAVFEIIQHIRMA 78
>UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RAMP4
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Ribosome associated membrane protein RAMP4
containing protein - Tetrahymena thermophila SB210
Length = 107
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 88 TRLASXNITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSI 240
+ L + N+T RG VP + K K + V PW+L +F+FVV GSA+FQ + +
Sbjct: 55 SNLHNKNVTNRGKVPSSLKSKEEK-SVGPWVLGIFLFVVVGSAIFQILNVV 104
>UniRef50_Q7RG55 Cluster: Arabidopsis thaliana F17L21.12-related;
n=3; Plasmodium|Rep: Arabidopsis thaliana
F17L21.12-related - Plasmodium yoelii yoelii
Length = 67
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +1
Query: 106 NITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXI 231
NIT RG+VP + +K +Y V P LL +FIF+V GS V Q +
Sbjct: 17 NITNRGNVPTSIAKKGKKYTVGPILLGIFIFIVIGSVVIQIL 58
>UniRef50_A5KBT3 Cluster: Ribosome associated membrane protein
RAMP4, putative; n=3; Plasmodium|Rep: Ribosome
associated membrane protein RAMP4, putative - Plasmodium
vivax
Length = 102
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 106 NITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSI 240
NIT RG+VP + +K ++PV P LL +F+FVV GS Q + I
Sbjct: 51 NITHRGNVPASLVKKGKKHPVGPILLVIFVFVVIGSVFIQMLSMI 95
>UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11;
Liliopsida|Rep: Os11g0637400 protein - Oryza sativa
subsp. japonica (Rice)
Length = 573
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +1
Query: 106 NITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGS 213
NIT RG VP+T +K YPV P +L FIFVV GS
Sbjct: 28 NITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGS 63
>UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 460
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +1
Query: 106 NITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGS 213
NIT RG VP+T +K YPV P +L FIFVV GS
Sbjct: 18 NITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGS 53
>UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 75
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 106 NITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXI 231
N+ +G VPK+ +K PV P LL +F+FVV GSA+FQ +
Sbjct: 25 NVNKQGKVPKSLIKKEENLPVGPILLGVFLFVVVGSALFQIL 66
>UniRef50_Q5CPN8 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 65
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/48 (50%), Positives = 28/48 (58%)
Frame = +1
Query: 94 LASXNITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQS 237
L NI RG V + K+ YPV P+ L LFIFVV GSA+ Q I S
Sbjct: 13 LYEKNIDKRGSVSSSKKKSG--YPVGPFALGLFIFVVIGSAIIQMIVS 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,102,222
Number of Sequences: 1657284
Number of extensions: 14502193
Number of successful extensions: 31850
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31842
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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