Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M09
         (846 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.33 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   4.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 775 SIVXLKKKTHNVHNLWS 825
           SI+ L ++T+NVH +WS
Sbjct: 279 SIIDLSQQTYNVHLMWS 295


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 591 KKRLLYSLHFNGICGLSCL 535
           KK+L+Y + F  I  L+C+
Sbjct: 34  KKKLVYCIIFGAIATLTCI 52


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 591 KKRLLYSLHFNGICGLSCL 535
           KK+L+Y + F  I  L+C+
Sbjct: 30  KKKLVYCIIFGAIATLTCI 48


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 462 PYVSASRFNPVSVKETSSHDC-TVKGTNGR 376
           PYV+ S ++P S+     + C T K  NG+
Sbjct: 854 PYVNGSEYHP-SIVSLGEYKCVTCKCENGK 882


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,289
Number of Sequences: 336
Number of extensions: 3943
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)