Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M09
(846 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029067-1|AAH29067.1| 65|Homo sapiens chromosome 13 open read... 73 2e-12
AL138960-2|CAI12995.1| 65|Homo sapiens RP11-269C23.1 protein. 73 2e-12
CR533472-1|CAG38503.1| 66|Homo sapiens SERP1 protein. 64 5e-10
BC112365-1|AAI12366.1| 66|Homo sapiens stress-associated endop... 64 5e-10
BC112364-1|AAI12365.1| 66|Homo sapiens stress-associated endop... 64 5e-10
BC108314-1|AAI08315.1| 66|Homo sapiens stress-associated endop... 64 5e-10
AF136975-1|AAG49436.1| 66|Homo sapiens ribosome attached membr... 64 5e-10
AB022427-1|BAA81895.1| 66|Homo sapiens SERP1 protein. 64 5e-10
DQ534757-1|ABF82393.1| 323|Homo sapiens Kruppel-like factor 14 ... 33 1.7
DQ534756-1|ABF82392.1| 192|Homo sapiens Kruppel-like factor 14 ... 33 1.7
AF490374-1|AAM08349.1| 323|Homo sapiens BTEB5 protein. 33 1.7
M74088-1|AAA03586.1| 2843|Homo sapiens APC protein. 31 6.9
M73548-2|AAA60354.1| 2743|Homo sapiens polyposis locus-encoded p... 31 6.9
M73548-1|AAA60353.1| 2844|Homo sapiens polyposis locus-encoded p... 31 6.9
AB210001-1|BAE06083.1| 2845|Homo sapiens APC variant protein pro... 31 6.9
>BC029067-1|AAH29067.1| 65|Homo sapiens chromosome 13 open reading
frame 21 protein.
Length = 65
Score = 72.5 bits (170), Expect = 2e-12
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +1
Query: 100 SXNITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT RG+V KT + + +YPV PWLLALF+FVVCGSA+FQ IQSI +
Sbjct: 15 SKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRM 63
>AL138960-2|CAI12995.1| 65|Homo sapiens RP11-269C23.1 protein.
Length = 65
Score = 72.5 bits (170), Expect = 2e-12
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +1
Query: 100 SXNITMRGHVPKTPKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT RG+V KT + + +YPV PWLLALF+FVVCGSA+FQ IQSI +
Sbjct: 15 SKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRM 63
>CR533472-1|CAG38503.1| 66|Homo sapiens SERP1 protein.
Length = 66
Score = 64.5 bits (150), Expect = 5e-10
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = +1
Query: 100 SXNITMRGHVPKT----PKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT RG+V KT P+EKA+ V PWLLALFIFVVCGSA+FQ IQSI +
Sbjct: 15 SKNITQRGNVAKTSRNAPEEKAS---VGPWLLALFIFVVCGSAIFQIIQSIRM 64
>BC112365-1|AAI12366.1| 66|Homo sapiens stress-associated
endoplasmic reticulum protein 1 protein.
Length = 66
Score = 64.5 bits (150), Expect = 5e-10
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = +1
Query: 100 SXNITMRGHVPKT----PKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT RG+V KT P+EKA+ V PWLLALFIFVVCGSA+FQ IQSI +
Sbjct: 15 SKNITQRGNVAKTSRNAPEEKAS---VGPWLLALFIFVVCGSAIFQIIQSIRM 64
>BC112364-1|AAI12365.1| 66|Homo sapiens stress-associated
endoplasmic reticulum protein 1 protein.
Length = 66
Score = 64.5 bits (150), Expect = 5e-10
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = +1
Query: 100 SXNITMRGHVPKT----PKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT RG+V KT P+EKA+ V PWLLALFIFVVCGSA+FQ IQSI +
Sbjct: 15 SKNITQRGNVAKTSRNAPEEKAS---VGPWLLALFIFVVCGSAIFQIIQSIRM 64
>BC108314-1|AAI08315.1| 66|Homo sapiens stress-associated
endoplasmic reticulum protein 1 protein.
Length = 66
Score = 64.5 bits (150), Expect = 5e-10
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = +1
Query: 100 SXNITMRGHVPKT----PKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT RG+V KT P+EKA+ V PWLLALFIFVVCGSA+FQ IQSI +
Sbjct: 15 SKNITQRGNVAKTSRNAPEEKAS---VGPWLLALFIFVVCGSAIFQIIQSIRM 64
>AF136975-1|AAG49436.1| 66|Homo sapiens ribosome attached membrane
protein 4 protein.
Length = 66
Score = 64.5 bits (150), Expect = 5e-10
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = +1
Query: 100 SXNITMRGHVPKT----PKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT RG+V KT P+EKA+ V PWLLALFIFVVCGSA+FQ IQSI +
Sbjct: 15 SKNITQRGNVAKTSRNAPEEKAS---VGPWLLALFIFVVCGSAIFQIIQSIRM 64
>AB022427-1|BAA81895.1| 66|Homo sapiens SERP1 protein.
Length = 66
Score = 64.5 bits (150), Expect = 5e-10
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = +1
Query: 100 SXNITMRGHVPKT----PKEKAAQYPVAPWLLALFIFVVCGSAVFQXIQSIXL 246
S NIT RG+V KT P+EKA+ V PWLLALFIFVVCGSA+FQ IQSI +
Sbjct: 15 SKNITQRGNVAKTSRNAPEEKAS---VGPWLLALFIFVVCGSAIFQIIQSIRM 64
>DQ534757-1|ABF82393.1| 323|Homo sapiens Kruppel-like factor 14
protein.
Length = 323
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 81 LANASRQXKHHNAGACPQNSQGKSSPISCGTLAPCS 188
L +S + N+G P+ S G S PI C PCS
Sbjct: 92 LRGSSGEGSWENSGEAPRASSGFSDPIPCSVQTPCS 127
>DQ534756-1|ABF82392.1| 192|Homo sapiens Kruppel-like factor 14
protein.
Length = 192
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 81 LANASRQXKHHNAGACPQNSQGKSSPISCGTLAPCS 188
L +S + N+G P+ S G S PI C PCS
Sbjct: 92 LRGSSGEGSWENSGEAPRASSGFSDPIPCSVQTPCS 127
>AF490374-1|AAM08349.1| 323|Homo sapiens BTEB5 protein.
Length = 323
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 81 LANASRQXKHHNAGACPQNSQGKSSPISCGTLAPCS 188
L +S + N+G P+ S G S PI C PCS
Sbjct: 92 LRGSSGEGSWENSGEAPRASSGFSDPIPCSVQTPCS 127
>M74088-1|AAA03586.1| 2843|Homo sapiens APC protein.
Length = 2843
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 129 PQNSQGKSSPISCGTLAPCSLHLRSVWLCCVPXNPINKXSLNHEDN-WRTAIENTIK*QH 305
P +SQG+ S AP S H+ +C + ++ S++ ED+ + I + + +
Sbjct: 1992 PPDSQGEPSKPQASGYAPKSFHVEDTPVCFSRNSSLSSLSIDSEDDLLQECISSAMPKKK 2051
Query: 306 YPSKVRHNLHQH 341
PS+++ + +H
Sbjct: 2052 KPSRLKGDNEKH 2063
>M73548-2|AAA60354.1| 2743|Homo sapiens polyposis locus-encoded
protein protein.
Length = 2743
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 129 PQNSQGKSSPISCGTLAPCSLHLRSVWLCCVPXNPINKXSLNHEDN-WRTAIENTIK*QH 305
P +SQG+ S AP S H+ +C + ++ S++ ED+ + I + + +
Sbjct: 1892 PPDSQGEPSKPQASGYAPKSFHVEDTPVCFSRNSSLSSLSIDSEDDLLQECISSAMPKKK 1951
Query: 306 YPSKVRHNLHQH 341
PS+++ + +H
Sbjct: 1952 KPSRLKGDNEKH 1963
>M73548-1|AAA60353.1| 2844|Homo sapiens polyposis locus-encoded
protein protein.
Length = 2844
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 129 PQNSQGKSSPISCGTLAPCSLHLRSVWLCCVPXNPINKXSLNHEDN-WRTAIENTIK*QH 305
P +SQG+ S AP S H+ +C + ++ S++ ED+ + I + + +
Sbjct: 1993 PPDSQGEPSKPQASGYAPKSFHVEDTPVCFSRNSSLSSLSIDSEDDLLQECISSAMPKKK 2052
Query: 306 YPSKVRHNLHQH 341
PS+++ + +H
Sbjct: 2053 KPSRLKGDNEKH 2064
>AB210001-1|BAE06083.1| 2845|Homo sapiens APC variant protein protein.
Length = 2845
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 129 PQNSQGKSSPISCGTLAPCSLHLRSVWLCCVPXNPINKXSLNHEDN-WRTAIENTIK*QH 305
P +SQG+ S AP S H+ +C + ++ S++ ED+ + I + + +
Sbjct: 1994 PPDSQGEPSKPQASGYAPKSFHVEDTPVCFSRNSSLSSLSIDSEDDLLQECISSAMPKKK 2053
Query: 306 YPSKVRHNLHQH 341
PS+++ + +H
Sbjct: 2054 KPSRLKGDNEKH 2065
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,608,140
Number of Sequences: 237096
Number of extensions: 2233438
Number of successful extensions: 3989
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3983
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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